RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 GPR78Q96P69 363 aa13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 TNFRSF12AQ9NP84 129 aa13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 CHCHD3Q9NX63 227 aaKnown RBP13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 GMEB1Q9Y692 573 aa13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 TLL2Q9Y6L7 1015 aa13.6□□□□□ -0.23
SNCAIP-209ENST00000508017 RALGAPA2Q2PPJ7 1873 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 H3BNH8 94 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 CCDC166P0CW27 439 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 TMEM62Q0P6H9 643 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 SLC12A1Q13621 1099 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 VGLL4Q14135 290 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 LPIN1Q14693 890 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 PPP1R3AQ16821 1122 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 ZNF280DQ6N043 979 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 LAYNQ6UX15 382 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 LPCAT2Q7L5N7 544 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 BNIPLQ7Z465 357 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 PELI3Q8N2H9 469 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 DIS3LQ8TF46 1054 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 NT5C3BQ969T7 300 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 MAELQ96JY0 434 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 HAUS8Q9BT25 410 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 FTHL17Q9BXU8 183 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 TXNRD2Q9NNW7 524 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 OLAHQ9NV23 265 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 TRIM24O15164 1050 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 HSPA1AP0DMV8 641 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 HSPA1BP0DMV9 641 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 CKMT2P17540 419 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 NOS2P35228 1153 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 NPY2RP49146 381 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 RHDQ02161 417 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 ADRM1Q16186 407 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 REP15Q6BDI9 236 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 SULF1Q8IWU6 871 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 LRRC52Q8N7C0 313 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 IRGQQ8WZA9 623 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 CACNA2D2Q9NY47 1150 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 CNOT6Q9ULM6 557 aaKnown RBP13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 ACOT9Q9Y305 439 aa13.59□□□□□ -0.23
SNCAIP-209ENST00000508017 ADRA1BP35368 520 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 STT3AP46977 705 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 CDK9P50750 372 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 PRKAA2P54646 552 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 TPI1P60174 286 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 SULT2A1Q06520 285 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 LRP8Q14114 963 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 KLHL35Q6PF15 583 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 OTOP3Q7RTS5 596 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 CTU1Q7Z7A3 348 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 BEST2Q8NFU1 509 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 USP33Q8TEY7 942 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 WNT8BQ93098 351 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 OSBPL11Q9BXB4 747 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 UNC93B1Q9H1C4 597 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 SNX25Q9H3E2 840 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 CYP4F12Q9HCS2 524 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 CCDC167Q9P0B6 97 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 MYRFQ9Y2G1 1151 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 MAGEB16A2A368 324 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 NRP1O14786 923 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 TIPRLO75663 272 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 JCHAINP01591 159 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 AKAP5P24588 427 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 HOXA11P31270 313 aaPredicted RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 C1QTNF8P60827 252 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 ARHGAP1Q07960 439 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 AGKQ53H12 422 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 KRT80Q6KB66 452 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 TRIM74Q86UV6 250 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 TRIM73Q86UV7 250 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 OSTM1Q86WC4 334 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 APOBEC3FQ8IUX4 373 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 FIBCD1Q8N539 461 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 SPPL2BQ8TCT7 592 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 SLC39A3Q9BRY0 314 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 DUS2Q9NX74 493 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 UTP6Q9NYH9 597 aaKnown RBP13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 KLK14Q9P0G3 267 aa13.58□□□□□ -0.24
SNCAIP-209ENST00000508017 TNS1Q9HBL0 1735 aaKnown RBP13.57□□□□□ -0.24
SNCAIP-209ENST00000508017 FAM95CA0A1B0GW59 222 aa13.57□□□□□ -0.24
SNCAIP-209ENST00000508017 HEATR9A2RTY3 570 aa13.57□□□□□ -0.24
SNCAIP-209ENST00000508017 ZNF839A8K0R7 811 aa13.57□□□□□ -0.24
SNCAIP-209ENST00000508017 HTRA2O43464 458 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms