RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	SEMA4F	O95754	770 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	ZBED1	O96006	694 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	PRB1	P04280	392 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	IGHV4-34	P06331	123 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	PGR	P06401	933 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	KRT13	P13646	458 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	TRIM21	P19474	475 aa	Known RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	PI3	P19957	117 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	OXTR	P30559	389 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	SLC6A4	P31645	630 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CD70	P32970	193 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	AFF3	P51826	1226 aa	Known RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	NDUFA8	P51970	172 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	ZNF132	P52740	706 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	RPS14	P62263	151 aa	Known RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CHRNE	Q04844	493 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CYP4F3	Q08477	520 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CBWD6	Q4V339	395 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	FAM133B	Q5BKY9	247 aa	Known RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CBWD3	Q5JTY5	395 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CBWD5	Q5RIA9	395 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	PRAMEF14	Q5SWL7	426 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	MBLAC2	Q68D91	279 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	ARHGAP17	Q68EM7	881 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	KRT39	Q6A163	491 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	IL27RA	Q6UWB1	636 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	DHRS13	Q6UX07	377 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	GATAD2A	Q86YP4	633 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	MRPL41	Q8IXM3	137 aa	Known RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	UBA3	Q8TBC4	463 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CLEC4C	Q8WTT0	213 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	RHOV	Q96L33	236 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	SLC6A18	Q96N87	628 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	NUP58	Q9BVL2	599 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	SLC2A11	Q9BYW1	496 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	DCLK3	Q9C098	648 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	EBF2	Q9HAK2	575 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	PRSS16	Q9NQE7	514 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	GGA2	Q9UJY4	613 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	TSPAN16	Q9UKR8	245 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	STRIP2	Q9ULQ0	834 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	ANKRD6	Q9Y2G4	727 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	ZNF510	Q9Y2H8	683 aa		5.75	□□□□□ -1.49
ATXN3-210	ENST00000507965	ATRX	P46100	2492 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	ANKRD11	Q6UB99	2663 aa	Predicted RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	TRABD2B	A6NFA1	517 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	FAM47DP	A6NHR8	397 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965		O00370	1275 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PLK4	O00444	970 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	WNT9A	O14904	365 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	XPO1	O14980	1071 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	TBL1X	O60907	577 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	IGLV3-27	P01718	113 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	DNTT	P04053	509 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	WNT1	P04628	370 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PABPC1	P11940	636 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	LCP1	P13796	627 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	CD19	P15391	556 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PSMC2	P35998	433 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	CTSK	P43235	329 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	RGS7	P49802	495 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	CCT8	P50990	548 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	BCAT1	P54687	386 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	DAOA	P59103	153 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	BST2	Q10589	180 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	DNAJC3	Q13217	504 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	SHB	Q15464	509 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	NFIL3	Q16649	462 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	MPPE1	Q53F39	396 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	BSPRY	Q5W0U4	402 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	SLC6A19	Q695T7	634 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PM20D1	Q6GTS8	502 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	NADSYN1	Q6IA69	706 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	MMS22L	Q6ZRQ5	1243 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	DHX40	Q8IX18	779 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	AHI1	Q8N157	1196 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	ARHGAP18	Q8N392	663 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	GUF1	Q8N442	669 aa	Known RBP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	UBR7	Q8N806	425 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	ANKRD52	Q8NB46	1076 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	CCDC150	Q8NCX0	1101 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	FBXL13	Q8NEE6	735 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PIP4K2C	Q8TBX8	421 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	WFIKKN2	Q8TEU8	576 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	TFAP2B	Q92481	460 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	IGSF8	Q969P0	613 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	SEC16B	Q96JE7	1060 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	LMLN	Q96KR4	655 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	MRGPRX3	Q96LB0	322 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	SIGLEC10	Q96LC7	697 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	TMEM74	Q96NL1	305 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	CDC6	Q99741	560 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	ZSWIM1	Q9BR11	485 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	BTBD1	Q9H0C5	482 aa		5.74	□□□□□ -1.49
ATXN3-210	ENST00000507965	PCED1A	Q9H1Q7	454 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms