RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 POLR1EQ9GZS1 481 aaKnown RBP14.39□□□□□ -0.11
RNF4-208ENST00000507247 LTB4R2Q9NPC1 389 aa14.39□□□□□ -0.11
RNF4-208ENST00000507247 C11orf16Q9NQ32 467 aa14.39□□□□□ -0.11
RNF4-208ENST00000507247 ASIC3Q9UHC3 531 aa14.39□□□□□ -0.11
RNF4-208ENST00000507247 RSPH14Q9UHP6 348 aa14.39□□□□□ -0.11
RNF4-208ENST00000507247 DMGDHQ9UI17 866 aaKnown RBP14.39□□□□□ -0.11
RNF4-208ENST00000507247 STON1Q9Y6Q2 735 aa14.39□□□□□ -0.11
RNF4-208ENST00000507247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 BHMG1C9JSJ3 638 aaPredicted RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 INSIG1O15503 277 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 BNIP3LO60238 219 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 RNF40O75150 1001 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 HEXIM1O94992 359 aaKnown RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 MT-CYBP00156 380 aaPredicted RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 GSRP00390 522 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 IVDP26440 423 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 SCNN1BP51168 640 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 TERF1P54274 439 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 FZD5Q13467 585 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 HNRNPA1L2Q32P51 320 aaKnown RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 FBXO43Q4G163 708 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 CARD16Q5EG05 197 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 PKN3Q6P5Z2 889 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 SERPINA13PQ6UXR4 307 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 DPY19L3Q6ZPD9 716 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 IL17RCQ8NAC3 791 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 CHST14Q8NCH0 376 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 OR2AP1Q8NGE2 309 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 OR2A12Q8NGT7 310 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 IMP4Q96G21 291 aaKnown RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 OXNAD1Q96HP4 312 aaPredicted RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 SHDQ96IW2 340 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 GDAP1L1Q96MZ0 367 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 FCRL5Q96RD9 977 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 NUDCD1Q96RS6 583 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 FOXQ1Q9C009 403 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 SLC25A51Q9H1U9 297 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 TBC1D17Q9HA65 648 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 ETNK1Q9HBU6 452 aa14.38□□□□□ -0.11
RNF4-208ENST00000507247 EVLQ9UI08 416 aaPredicted RBP14.38□□□□□ -0.11
RNF4-208ENST00000507247 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 FAM86C2PA6NEL3 165 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 EFCAB8A8MWE9 144 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 ADAM23O75077 832 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 SIN3BO75182 1162 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 KLF8O95600 359 aaPredicted RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 IGSF6O95976 241 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 RHOXF2BP0C7M4 288 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 GKP32189 559 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 FDFT1P37268 417 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 CD86P42081 329 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 RPL21P46778 160 aaKnown RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 CSNK1DP48730 415 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 CCNHP51946 323 aaPredicted RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 SNRPD1P62314 119 aaKnown RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 MRPS21P82921 87 aaKnown RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 SKOR1P84550 965 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF4-208ENST00000507247 UBXN2BQ14CS0 331 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 TRADDQ15628 312 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 PARP6Q2NL67 630 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 GLE1Q53GS7 698 aaKnown RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 SYCP2LQ5T4T6 812 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 DUPD1Q68J44 220 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 NCEH1Q6PIU2 408 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 Q6ZS52 159 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 SRLQ86TD4 932 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 KLHDC8BQ8IXV7 354 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 CHPFQ8IZ52 775 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 RPLP0P6Q8NHW5 317 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 KCNV2Q8TDN2 545 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 TADA1Q96BN2 335 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF4-208ENST00000507247 RHOXF2Q9BQY4 288 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 ERP44Q9BS26 406 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 DPH5Q9H2P9 285 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 NOD2Q9HC29 1040 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 SCUBE2Q9NQ36 999 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 RAB6BQ9NRW1 208 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 UBP1Q9NZI7 540 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 SLC8A2Q9UPR5 921 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 MRPS17Q9Y2R5 130 aaKnown RBP14.37□□□□□ -0.11
RNF4-208ENST00000507247 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
RNF4-208ENST00000507247 DNALI1O14645 258 aaPredicted RBP14.36□□□□□ -0.11
RNF4-208ENST00000507247 NPC1O15118 1278 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 EPHX1P07099 455 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 NTSR1P30989 418 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 ADCY8P40145 1251 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 BASP1P80723 227 aaKnown RBP14.36□□□□□ -0.11
RNF4-208ENST00000507247 OLIG2Q13516 323 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 SEMA5AQ13591 1074 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 C9orf64Q5T6V5 341 aa14.36□□□□□ -0.11
RNF4-208ENST00000507247 KDELC1Q6UW63 502 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms