RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ITPRIPL1Q6GPH6 555 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 Q6ZS52 159 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ZNF354CQ86Y25 554 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 RASGEF1CQ8N431 466 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 NPWQ8N729 165 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ST13P5Q8NFI4 369 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 OR52K2Q8NGK3 314 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 OR2A12Q8NGT7 310 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CCHCR1Q8TD31 782 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ALG3Q92685 438 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 KRT35Q92764 455 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 NKD2Q969F2 451 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 QKIQ96PU8 341 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 TLR10Q9BXR5 811 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CDH19Q9H159 772 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 DUSP15Q9H1R2 295 aaPredicted RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 EPC1Q9H2F5 836 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PABPC3Q9H361 631 aaKnown RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 RBM12Q9NTZ6 932 aaKnown RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 CACNA2D2Q9NY47 1150 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 DRG1Q9Y295 367 aaKnown RBP8.59□□□□□ -1.03
PDGFC-205ENST00000506880 ATP8A1Q9Y2Q0 1164 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 PPIL1Q9Y3C6 166 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 HYOU1Q9Y4L1 999 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 SNX10Q9Y5X0 201 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 OTOGLQ3ZCN5 2332 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 THADAQ6YHU6 1953 aa8.59□□□□□ -1.03
PDGFC-205ENST00000506880 GON4LQ3T8J9 2241 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 RALGAPA1Q6GYQ0 2036 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 TCRBV21S2A2A0A5A6 115 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 LRRC72A6NJI9 287 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 PRR5-ARHGAP8B1AHC4 643 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 C10orf142B7Z368 130 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 PSMD11O00231 422 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 DFFAO00273 331 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 TRIM24O15164 1050 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 HTRA2O43464 458 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 TSPAN6O43657 245 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SNAP91O60641 907 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SIN3BO75182 1162 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF821O75541 412 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ANXA9O76027 345 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 FTCDO95954 541 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 PEX11BO96011 259 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ITGAVP06756 1048 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SERPINF2P08697 491 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 CD48P09326 243 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 PYGMP11217 842 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 GABRG2P18507 467 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 CD6P30203 668 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ACTN2P35609 894 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 TNNT3P45378 269 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 CCR5P51681 352 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SEC13P55735 322 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 RPS14P62263 151 aaKnown RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ETF1P62495 437 aaKnown RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 OVGP1Q12889 678 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 MMRN1Q13201 1228 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 AGERQ15109 404 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 P3H1Q32P28 736 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ACCSLQ4AC99 568 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SYCP2LQ5T4T6 812 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 KIAA1161Q6NSJ0 714 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 TMEM92Q6UXU6 159 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SLC13A5Q86YT5 568 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 KLHDC8BQ8IXV7 354 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 MAML2Q8IZL2 1156 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 GRK7Q8WTQ7 553 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 CYB5D2Q8WUJ1 264 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 RNF25Q96BH1 459 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 ECHDC3Q96DC8 303 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 PHF12Q96QT6 1004 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 NAPGQ99747 312 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 C1QTNF7Q9BXJ2 289 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 BTBD1Q9H0C5 482 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SLC25A51Q9H1U9 297 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 BCCIPQ9P287 314 aaKnown RBP eCLIP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 HECAQ9UBI9 543 aaPredicted RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 TRIM10Q9UDY6 481 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SUSD2Q9UGT4 822 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SLCO3A1Q9UIG8 710 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 RAB23Q9ULC3 237 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 SNX12Q9UMY4 172 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 DMTF1Q9Y222 760 aa8.58□□□□□ -1.04
PDGFC-205ENST00000506880 AAR2Q9Y312 384 aaKnown RBP8.58□□□□□ -1.04
PDGFC-205ENST00000506880 NUMA1Q14980 2115 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 RGSL1A5PLK6 1076 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 C5orf60A6NFR6 353 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 TTC34A8MYJ7 566 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CCDC188H7C350 402 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SMAPO00193 183 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 PGRMC1O00264 195 aaKnown RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 KCNK3O14649 394 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 INSIG1O15503 277 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 MAGEC1O60732 1142 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 RPP40O75818 363 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms