RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ADAMTS10Q9H324 1103 aa17.31■□□□□ 0.36
SQSTM1-211ENST00000506690 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
SQSTM1-211ENST00000506690 SSC5DA1L4H1 1573 aa17.31■□□□□ 0.36
SQSTM1-211ENST00000506690 SAC3D1A6NKF1 404 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 J3QRK9 145 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 ITGB3P05106 788 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 NFICP08651 508 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 FSTL1Q12841 308 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 NFATC3Q12968 1075 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 ZBTB17Q13105 803 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 OLIG2Q13516 323 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 NR1D2Q14995 579 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 HSDL1Q3SXM5 330 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 EGFLAMQ63HQ2 1017 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 DHFR2Q86XF0 187 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 OR52K1Q8NGK4 314 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 OR2T34Q8NGX1 318 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 OR2T3Q8NH03 318 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 FBXL8Q96CD0 374 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 HEPHQ9BQS7 1158 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 MUC3BQ9H195 1237 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 CCM2LQ9NUG4 571 aaPredicted RBP17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 MRGBPQ9NV56 204 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 GID8Q9NWU2 228 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 IGKV6D-21A0A0A0MT36 114 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 VWA5AO00534 786 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 MAFO75444 373 aaPredicted RBP17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 SEC24DO94855 1032 aaPredicted RBP17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 CXCL8P10145 99 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 GLUD2P49448 558 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 INCA1Q0VD86 236 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 ANO4Q32M45 955 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 ZNF362Q5T0B9 420 aaPredicted RBP17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 SCUBE3Q8IX30 993 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 CENPIQ92674 756 aaPredicted RBP17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 RIC8BQ9NVN3 520 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 NCKIPSDQ9NZQ3 722 aa17.3■□□□□ 0.36
SQSTM1-211ENST00000506690 CFAP99D6REC4 459 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 DLX3O60479 287 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GSTT2P0CG29 244 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GSTT2BP0CG30 244 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GOT1P17174 413 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 HDCP19113 662 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 HADHAP40939 763 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GRM5P41594 1212 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 PTPN9P43378 593 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 NDST1P52848 882 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 FAM45BPQ6NSW5 357 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 TMEM192Q8IY95 271 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 ZNF567Q8N184 647 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 FSTL5Q8N475 847 aaPredicted RBP17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 FAM45AQ8TCE6 357 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GPR22Q99680 433 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 TUBA1CQ9BQE3 449 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 TLK1Q9UKI8 766 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 SLC39A10Q9ULF5 831 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 SNX9Q9Y5X1 595 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 MFSD11O43934 449 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 IL18RAPO95256 599 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 ZNF182P17025 639 aaPredicted RBP17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GRIA3P42263 894 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 GLRBP48167 497 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 SQLEQ14534 574 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 CYP2A13Q16696 494 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 LRRC8EQ6NSJ5 796 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 KCTD8Q6ZWB6 473 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 TMEM110Q86TL2 294 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 SCAIQ8N9R8 606 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 CD320Q9NPF0 282 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 AGPAT4Q9NRZ5 378 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 SPATA7Q9P0W8 599 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 KIAA1257Q9ULG3 409 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 TCAF1Q9Y4C2 921 aa17.29■□□□□ 0.36
SQSTM1-211ENST00000506690 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 GABBR2O75899 941 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 C7P10643 843 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 ATP6V1B2P21281 511 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 ATICP31939 592 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 MPP1Q00013 466 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 TNK2Q07912 1038 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 FASTKQ14296 549 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 GRM3Q14832 879 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 GOLGA7BQ2TAP0 167 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 PKDCCQ504Y2 493 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 HACD2Q6Y1H2 254 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 CCDC80Q76M96 950 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 CCDC185Q8N715 623 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 C12orf29Q8N999 325 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 SPPL2BQ8TCT7 592 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 SEPT8Q92599 483 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 MAF1Q9H063 256 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 VANGL2Q9ULK5 521 aa17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 RUVBL2Q9Y230 463 aaKnown RBP17.28■□□□□ 0.36
SQSTM1-211ENST00000506690 GPC6Q9Y625 555 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms