RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZC3H13Q5T200 1668 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARHGAP23Q9P227 1491 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM94Q12767 1356 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM237BA0A1B0GVD1 139 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 LIPT2A6NK58 231 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 C17orf100A8MU93 164 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 KCNJ18B7U540 433 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 H7C1Q1 480 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 P4HA2O15460 535 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 HNRNPCL1O60812 293 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CBX6O95503 412 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 GALTP07902 379 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CYP2D6P10635 497 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 FCGR2AP12318 317 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 AKR1A1P14550 325 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF8P17098 575 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CDH2P19022 906 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CD72P21854 359 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 DRD4P21917 467 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 TM4SF1P30408 202 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 HADHAP40939 763 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CLK3P49761 638 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SNX16P57768 344 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 OLR1P78380 273 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PRAMEP78395 509 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CYP4A11Q02928 519 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CALD1Q05682 793 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 EFEMP1Q12805 493 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 EPS8Q12929 822 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLC14A1Q13336 389 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF169Q14929 603 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 KPNB1Q14974 876 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 MED22Q15528 200 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 EDRF1Q3B7T1 1238 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 LSM12Q3MHD2 195 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 C10orf76Q5T2E6 689 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM268Q5VZI3 342 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZKSCAN2Q63HK3 967 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ATG9BQ674R7 924 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 NCEH1Q6PIU2 408 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 C17orf99Q6UX52 265 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 Q6YL49 198 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 RTL10Q7L3V2 364 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PRSS45Q7RTY3 260 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLC46A3Q7Z3Q1 461 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SZRD1Q7Z422 152 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 GRASPQ7Z6J2 395 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 KRT77Q7Z794 578 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 NEK8Q86SG6 692 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 KLBQ86Z14 1044 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 RHPN2Q8IUC4 686 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SRBD1Q8N5C6 995 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 FRMD1Q8N878 549 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SCAIQ8N9R8 606 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 NEK9Q8TD19 979 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM149B1Q96BN6 582 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 INTS12Q96CB8 462 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 P2RY11Q96G91 374 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PDLIM2Q96JY6 352 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF347Q96SE7 839 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 MACROD1Q9BQ69 325 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLF1Q9BQI6 1058 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 KAT14Q9H8E8 782 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 TXNRD2Q9NNW7 524 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ENTPD7Q9NQZ7 604 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 FOXJ2Q9P0K8 574 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 HSPB7Q9UBY9 170 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLCO3A1Q9UIG8 710 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 CDH22Q9UJ99 828 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 RPS6KA6Q9UK32 745 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PCDHGB4Q9UN71 923 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 TNFSF13BQ9Y275 285 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 EPN1Q9Y6I3 576 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 UBR1Q8IWV7 1749 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PIK3C2BO00750 1634 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 EIF2AK4Q9P2K8 1649 aaKnown RBP3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 DUOX2Q9NRD8 1548 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 FGD6Q6ZV73 1430 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 ERBINQ96RT1 1412 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 PASKQ96RG2 1323 aa3.43□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM2Q9UHN6 1383 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 POLR2AP24928 1970 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 PTPN23Q9H3S7 1636 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 TCRBV7S3A2A0A539 114 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 TCRBV5S1A1TA0A578 114 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARHGAP10A1A4S6 786 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 SYNDIG1LA6NDD5 238 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 PABPN1LA6NDY0 278 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 LRRC53A6NM62 1247 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 AGAP14A8MT82 685 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 EIF3CLB5ME19 914 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 UBE2Q2LH0YL09 131 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 BCAT2O15382 392 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 TACC1O75410 805 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 BEST1O76090 585 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 JTBO76095 146 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 SERPINC1P01008 464 aa3.42□□□□□ -1.86
TRAPPC11-205ENST00000506426 IL1AP01583 271 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms