RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PCDHB9Q9Y5E1 797 aa17.03■□□□□ 0.32
PDLIM7-215ENST00000506161 ITPR1Q14643 2758 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 LRP4O75096 1905 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 RASA4BC9J798 803 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 INSIG1O15503 277 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 RASA4O43374 803 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 KDELR3O43731 214 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 ZIC2O95409 532 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 FTLP02792 175 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 PRNPP04156 253 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 CAPNS1P04632 268 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 ADRB3P13945 408 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 PSMA2P25787 234 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 POLD3Q15054 466 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 TMEM259Q4ZIN3 620 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 EFHC2Q5JST6 749 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 DCUN1D2Q6PH85 259 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 GCNT7Q6ZNI0 430 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 HDAC8Q9BY41 377 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 PREBQ9HCU5 417 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 HECAQ9UBI9 543 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 CNOT8Q9UFF9 292 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 PCSK1NQ9UHG2 260 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 FADS3Q9Y5Q0 445 aa17.02■□□□□ 0.32
PDLIM7-215ENST00000506161 COL27A1Q8IZC6 1860 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 FAM221BA6H8Z2 402 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 WASH4PA8MWX3 477 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 SDC3O75056 442 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 TMCC1O94876 653 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 SERPINC1P01008 464 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 ITGB7P26010 798 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 IL1R2P27930 398 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 EPHA8P29322 1005 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 SLC20A2Q08357 652 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 KLHL30Q0D2K2 578 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 CYTH1Q15438 398 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 FILIP1LQ4L180 1135 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 TPRG1LQ5T0D9 272 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 ARHGAP36Q6ZRI8 547 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 HORMAD1Q86X24 394 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 CPNE8Q86YQ8 564 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 NPWQ8N729 165 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 MFSD2AQ8NA29 543 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 OR13H1Q8NG92 308 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 ISG20Q96AZ6 181 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 ZNF653Q96CK0 615 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 CELF6Q96J87 481 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 VCPIP1Q96JH7 1222 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 NSMCE3Q96MG7 304 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 PDFQ9HBH1 243 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
PDLIM7-215ENST00000506161 ADAMTS20P59510 1910 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 EIF4E1BA6NMX2 242 aaKnown RBP17■□□□□ 0.31
PDLIM7-215ENST00000506161 J3KR12 359 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 BUB1O43683 1085 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 LRCH4O75427 683 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 MIPP30301 263 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 RGRP47804 291 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 NEK3P51956 506 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 DNAJC3Q13217 504 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 SERINC3Q13530 473 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 HNRNPDQ14103 355 aaKnown RBP17■□□□□ 0.31
PDLIM7-215ENST00000506161 COL28A1Q2UY09 1125 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 TXNRD3NBQ6F5E7 133 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 ARHGAP12Q8IWW6 846 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 OR2AP1Q8NGE2 309 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 BTBD6Q96KE9 485 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 EXOC2Q96KP1 924 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 BMFQ96LC9 184 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 CCDC114Q96M63 670 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 SLC39A8Q9C0K1 460 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 ISCUQ9H1K1 167 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
PDLIM7-215ENST00000506161 LRRC19Q9H756 370 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 GDF3Q9NR23 364 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 MYO1AQ9UBC5 1043 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 DMTF1Q9Y222 760 aa17■□□□□ 0.31
PDLIM7-215ENST00000506161 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
PDLIM7-215ENST00000506161 POM121BA6NF01 834 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 C16orf96A6NNT2 1141 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 PRAMEF26H0Y7S4 382 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 KRIT1O00522 736 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 PCDH8O95206 1070 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 GSRP00390 522 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 UGT2B4P06133 528 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 CCDC172P0C7W6 258 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 GZMAP12544 262 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 GRK6P43250 576 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 RECQLP46063 649 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 ZSCAN23Q3MJ62 389 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 SETMARQ53H47 684 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 PLPP6Q8IY26 295 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 UMODL1-AS1Q8N2C9 162 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 RYBPQ8N488 228 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 EID2Q8N6I1 236 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
PDLIM7-215ENST00000506161 ARHGEF26Q96DR7 871 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms