RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 DSG1Q02413 1049 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 SPRED3Q2MJR0 410 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 RALGPS1Q5JS13 557 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 RASIP1Q5U651 963 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ZNF354CQ86Y25 554 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 C2CD4AQ8NCU7 369 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 HEY2Q9UBP5 337 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 CHD5Q8TDI0 1954 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ILVBLA1L0T0 632 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 PMPCBO75439 489 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ABLIM3O94929 683 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 MYL2P10916 166 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 CSRP3P50461 194 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 FBXW10Q5XX13 1052 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 SPATA22Q8NHS9 363 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 PABPC5Q96DU9 382 aaKnown RBP11.47□□□□□ -0.57
NFKB1-205ENST00000505458 NSL1Q96IY1 281 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 RNF208Q9H0X6 261 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 DNAJC28Q9NX36 388 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 NUDT5Q9UKK9 219 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 EMCNQ9ULC0 261 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 SLC27A5Q9Y2P5 690 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 ASB3Q9Y575 518 aa11.47□□□□□ -0.57
NFKB1-205ENST00000505458 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 VNN2O95498 520 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 ALOX15P16050 662 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 STMN1P16949 149 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 PFKLP17858 780 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 ATF6P18850 670 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 SLC1A6P48664 564 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 PGFP49763 221 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 PCLAFQ15004 111 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 TSTD2Q5T7W7 516 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 TBC1D1Q86TI0 1168 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 UNC5BQ8IZJ1 945 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 IFT43Q96FT9 208 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 APOL2Q9BQE5 337 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 MMADHCQ9H3L0 296 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 TLE6Q9H808 572 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 NMRAL1Q9HBL8 299 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 ACOT9Q9Y305 439 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 KLHL2O95198 593 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 URODP06132 367 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 C2P06681 752 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 SERPINF2P08697 491 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 RAB10P61026 200 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 USP10Q14694 798 aaKnown RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 POU6F1Q14863 301 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 PABPC1LQ4VXU2 614 aaKnown RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 NEPROQ6NW34 567 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 CES3Q6UWW8 571 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 TFAP2DQ7Z6R9 452 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 TTC9BQ8N6N2 239 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 RFWD2Q8NHY2 731 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 MFSD1Q9H3U5 465 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 ALG13Q9NP73 1137 aaKnown RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 PIH1D1Q9NWS0 290 aaKnown RBP11.46□□□□□ -0.57
NFKB1-205ENST00000505458 UBP1Q9NZI7 540 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 TBX21Q9UL17 535 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 PCDHB12Q9Y5F1 795 aa11.46□□□□□ -0.57
NFKB1-205ENST00000505458 A0A1B0GVM2 712 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 LOC285095A0A1B0GVY8 99 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ZNF840PA6NDX5 716 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 TRIM13O60858 407 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 MT-CYBP00156 380 aaPredicted RBP11.46□□□□□ -0.58
NFKB1-205ENST00000505458 SERPINA6P08185 405 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ELF1P32519 619 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 OR1D2P34982 312 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ABCE1P61221 599 aaKnown RBP11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ITKQ08881 620 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 RAB33AQ14088 237 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ALFQ53S48 1182 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 RAPH1Q70E73 1250 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.58
NFKB1-205ENST00000505458 ARID3BQ8IVW6 561 aaPredicted RBP11.46□□□□□ -0.58
NFKB1-205ENST00000505458 LGI2Q8N0V4 545 aa11.46□□□□□ -0.58
NFKB1-205ENST00000505458 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.46□□□□□ -0.58
NFKB1-205ENST00000505458 LMNAP02545 664 aaKnown RBP11.45□□□□□ -0.58
NFKB1-205ENST00000505458 TPH1P17752 444 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 GATMP50440 423 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 GNA12Q03113 381 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 KLC3Q6P597 504 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 ZYG11AQ6WRX3 759 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 SLC39A11Q8N1S5 342 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 PDCD6IPQ8WUM4 868 aaKnown RBP11.45□□□□□ -0.58
NFKB1-205ENST00000505458 IGSF8Q969P0 613 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 KCNK13Q9HB14 408 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 NDFIP2Q9NV92 336 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.45□□□□□ -0.58
NFKB1-205ENST00000505458 VPS9D1Q9Y2B5 631 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 SCN5AQ14524 2016 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 GOLGA8QA0A0J9YX86 632 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 CCDC189A1A4V9 331 aa11.45□□□□□ -0.58
NFKB1-205ENST00000505458 GOLGA8OA6NCC3 632 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms