RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TCF25Q9BQ70 676 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 POMKQ9H5K3 350 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 RXFP1Q9HBX9 757 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 MID1IP1Q9NPA3 183 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 ENPP3O14638 875 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 HNRNPCL1O60812 293 aaKnown RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 RNASEH1O60930 286 aaKnown RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 C8AP07357 584 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 OLIG2Q13516 323 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 FUT11Q495W5 492 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 KYAT3Q6YP21 454 aaKnown RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 ANKS1BQ7Z6G8 1248 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 TMCO2Q7Z6W1 182 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 CYP4X1Q8N118 509 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 RNF148Q8N7C7 305 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 CD101Q93033 1021 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 ACTR8Q9H981 624 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 RIC8BQ9NVN3 520 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 N4BP2Q86UW6 1770 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SYNDIG1LA6NDD5 238 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 CLTBP09497 229 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 LRPAP1P30533 357 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 UPP1Q16831 310 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SUGP1Q8IWZ8 645 aaKnown RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 TEX9Q8N6V9 391 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 PCYOX1LQ8NBM8 494 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SLC44A1Q8WWI5 657 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 N4BP2L2Q92802 583 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 DDX60LQ5H9U9 1706 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 MYH15Q9Y2K3 1946 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 SYCE1LA8MT33 242 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 PARNO95453 639 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TFEBP19484 476 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 PEX19P40855 299 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 SNRPD1P62314 119 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 PFKPQ01813 784 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 GNA12Q03113 381 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 QPCTQ16769 361 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 NCBP2-AS2Q69YL0 99 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 CYB5D1Q6P9G0 228 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 FBXL19Q6PCT2 694 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 DRICH1Q6PGQ1 229 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 POTEHQ6S545 545 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 C11orf96Q7Z7L8 435 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 UNC5BQ8IZJ1 945 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 ACE2Q9BYF1 805 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 GPR62Q9BZJ7 368 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TLE6Q9H808 572 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 VCX3AQ9NNX9 186 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 THG1LQ9NWX6 298 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 SLC17A6Q9P2U8 582 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 THSD7AQ9UPZ6 1657 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 GCATO75600 419 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 LUC7L3O95232 432 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 AP2A1O95782 977 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 C2P06681 752 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 NQO1P15559 274 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 CALRP27797 417 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 KCNK10P57789 538 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 STARD3Q14849 445 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 AGKQ53H12 422 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 DOK6Q6PKX4 331 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 RD3Q7Z3Z2 195 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 RTL3Q8N8U3 475 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 VRTNQ9H8Y1 702 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 MAN1C1Q9NR34 630 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 EVLQ9UI08 416 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 ARHGAP26Q9UNA1 814 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 LYPLA1O75608 230 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TPSB2P20231 275 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TPSAB1Q15661 275 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TXNDC8Q6A555 127 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 ESRP1Q6NXG1 681 aaKnown RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 DNAJB7Q7Z6W7 309 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TBATAQ96M53 351 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 TRIM15Q9C019 465 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 MYLK2Q9H1R3 596 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 PNMA8BQ9ULN7 279 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-207ENST00000504761 ACTL7BQ9Y614 415 aa14.24□□□□□ -0.13
TCOF1-207ENST00000504761 RBM47A0AV96 593 aaKnown RBP14.23□□□□□ -0.13
TCOF1-207ENST00000504761 MBLAC1A4D2B0 266 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-207ENST00000504761 CCDC85CA6NKD9 419 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 ALADP13716 330 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 MSH3P20585 1137 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 CLDN10P78369 228 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 PRKAA1Q13131 559 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 SERPINA13PQ6UXR4 307 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 TRMT11Q7Z4G4 463 aaKnown RBP14.23□□□□□ -0.13
TCOF1-207ENST00000504761 MPP5Q8N3R9 675 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 OR4K2Q8NGD2 314 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 CYP2S1Q96SQ9 504 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 SH3GL2Q99962 352 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 TNKS2Q9H2K2 1166 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 XPR1Q9UBH6 696 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 A0A1W2PRU2 124 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 ITGB1P05556 798 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 SEMG2Q02383 582 aa14.23□□□□□ -0.13
TCOF1-207ENST00000504761 TRIP4Q15650 581 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms