RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 FRMPD1Q5SYB0 1578 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 C5orf51A6NDU8 294 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DDX3XO00571 662 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 FCGR1AP12314 374 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TFEBP19484 476 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 RAB3AP20336 220 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NOS3P29474 1203 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 OR2B6P58173 313 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ERVFC1P60507 584 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 C2CD6Q53TS8 623 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DDI2Q5TDH0 399 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DCUN1D2Q6PH85 259 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 HAGHLQ6PII5 290 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 KLHL17Q6TDP4 642 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NEK8Q86SG6 692 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 IFNEQ86WN2 208 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 C10orf107Q8IVU9 208 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 OXR1Q8N573 874 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PAPD5Q8NDF8 572 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 AGBL3Q8NEM8 1001 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 OR5H6Q8NGV6 325 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SLC22A18Q96BI1 424 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 VCPIP1Q96JH7 1222 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ZPBPQ9BS86 351 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 STRA6Q9BX79 667 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 GON7Q9BXV9 100 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 WNT5BQ9H1J7 359 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 OBP2AQ9NY56 170 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ARPP21Q9UBL0 812 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF112Q9UJU3 913 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 GGA1Q9UJY5 639 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 KCNIP3Q9Y2W7 256 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SOCS7O14512 581 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MAP2K7O14733 419 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SYN3O14994 580 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TRIM24O15164 1050 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UGT1A9O60656 530 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RBMXL2O75526 392 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PRAMEF12O95522 483 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TSHRP16473 764 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 AHCYP23526 432 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RPA1P27694 616 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UQCRC1P31930 480 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 GP5P40197 560 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 HNRNPKP61978 463 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 DYNLL1P63167 89 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CTAG1AP78358 180 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SCN1BQ07699 218 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CBLBQ13191 982 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SLC12A1Q13621 1099 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ACVR2BQ13705 512 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 NFIXQ14938 502 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PDIA6Q15084 440 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 THEM4Q5T1C6 240 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PRPF38BQ5VTL8 546 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TRIQKQ629K1 86 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MTFR2Q6P444 385 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SCARA5Q6ZMJ2 495 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SSX6Q7RTT6 188 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ATPAF2Q8N5M1 289 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SEMA6DQ8NFY4 1073 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 NEDD1Q8NHV4 660 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 METTL21AQ8WXB1 218 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF606Q8WXB4 792 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 S100ZQ8WXG8 99 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 BAP1Q92560 729 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PITPNM3Q9BZ71 974 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UGT1A7Q9HAW7 530 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UGT1A10Q9HAW8 530 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UGT1A8Q9HAW9 530 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 POLD4Q9HCU8 107 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ARHGEF3Q9NR81 526 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TLR8Q9NR97 1041 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 INIPQ9NRY2 104 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SACM1LQ9NTJ5 587 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ADAM28Q9UKQ2 775 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PCDHA12Q9UN75 941 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PTGES3LE9PB15 166 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 E9PI62 339 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SERPINA3P01011 423 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 UGT2B4P06133 528 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 HK2P52789 917 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 GBX2P52951 348 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CAP1Q01518 475 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 STAT4Q14765 748 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RABGAP1LQ5R372 815 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 FRMD7Q6ZUT3 714 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 ZBED8Q8IZ13 594 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 OR2L8Q8NGY9 312 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 MCOLN3Q8TDD5 553 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SNX33Q8WV41 574 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 RAB7BQ96AH8 199 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 PPM1MQ96MI6 270 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 P2RX7Q99572 595 aaKnown RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 CXXC1Q9P0U4 656 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-204ENST00000504131 TBC1D24Q9ULP9 559 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 SLC9A8Q9Y2E8 581 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 EMILIN1Q9Y6C2 1016 aa6.31□□□□□ -1.4
CLCN3-204ENST00000504131 LOC100653049A0A140TA62 436 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms