RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 RRP1P56182 461 aaKnown RBP4.34□□□□□ -1.71
SUB1-204ENST00000504016 SLC18A3Q16572 532 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 ME3Q16798 604 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 SLC4A8Q2Y0W8 1093 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 NADSYN1Q6IA69 706 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 LRRTM4Q86VH4 590 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 CHD1LQ86WJ1 897 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 CAMK1DQ8IU85 385 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 ELP5Q8TE02 316 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 RUFY2Q8WXA3 655 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 DNASE2BQ8WZ79 361 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 TEFMQ96QE5 360 aaKnown RBP4.34□□□□□ -1.71
SUB1-204ENST00000504016 CLSTN3Q9BQT9 956 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 RASSF1Q9NS23 344 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 CTNNAL1Q9UBT7 734 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 OSGIN2Q9Y236 505 aa4.34□□□□□ -1.71
SUB1-204ENST00000504016 MST1RQ04912 1400 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 PER2O15055 1255 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 CEP104O60308 925 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 ADAP00813 363 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 GJC1P36383 396 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 PGM1P36871 562 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 AVPR1AP37288 418 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 Q5PR19 223 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 GJB7Q6PEY0 223 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 MOB3CQ70IA8 216 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 ADGRG6Q86SQ4 1221 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 LURAP1LQ8IV03 231 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 GABPB2Q8TAK5 448 aaPredicted RBP4.33□□□□□ -1.72
SUB1-204ENST00000504016 HERVK_113Q902F9 699 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
SUB1-204ENST00000504016 HVCN1Q96D96 273 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 APOLD1Q96LR9 279 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 FRG2BQ96QU4 278 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 EIF2AK1Q9BQI3 630 aaKnown RBP4.33□□□□□ -1.72
SUB1-204ENST00000504016 PHF7Q9BWX1 381 aaPredicted RBP4.33□□□□□ -1.72
SUB1-204ENST00000504016 TAOK3Q9H2K8 898 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 CD93Q9NPY3 652 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 NCKIPSDQ9NZQ3 722 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 IFT80Q9P2H3 777 aaPredicted RBP4.33□□□□□ -1.72
SUB1-204ENST00000504016 CNPY2Q9Y2B0 182 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 SLC4A4Q9Y6R1 1079 aa4.33□□□□□ -1.72
SUB1-204ENST00000504016 LOC102724159A0A0B4J2E5 919 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 FAM90A7PA6NKC0 464 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 FAM90A22PA8MWA6 464 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 FAM90A12PA8MX19 464 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 FAM90A23PA8MXZ1 464 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 FAM157AC9JC47 383 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 NPHP1O15259 732 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 LIASO43766 372 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 HOXC6P09630 235 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 GGT5P36269 586 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 CDH12P55289 794 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 DSCR9P59020 149 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 SELENOVP59797 346 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 RPL36AP83881 106 aaKnown RBP4.32□□□□□ -1.72
SUB1-204ENST00000504016 CHRNDQ07001 517 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 CAPSQ13938 189 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 PWP2Q15269 919 aaKnown RBP4.32□□□□□ -1.72
SUB1-204ENST00000504016 WDR45BQ5MNZ6 344 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 MAP3K21Q5TCX8 1036 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 DCAF12L2Q5VW00 463 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 HEPHL1Q6MZM0 1159 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 ZNF367Q7RTV3 350 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 SERPINA11Q86U17 422 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 CD180Q99467 661 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 EYA3Q99504 573 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 POLR3GLQ9BT43 218 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 SEZ6LQ9BYH1 1024 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 GPR63Q9BZJ6 419 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 WDR6Q9NNW5 1121 aaKnown RBP4.32□□□□□ -1.72
SUB1-204ENST00000504016 ATP8A2Q9NTI2 1148 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 RNF146Q9NTX7 359 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 GRHL1Q9NZI5 618 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 PTGDR2Q9Y5Y4 395 aa4.32□□□□□ -1.72
SUB1-204ENST00000504016 TSPAN3O60637 253 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 CLDN7O95471 211 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 IGKV3-20P01619 116 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 KLKB1P03952 638 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 HNRNPA1P09651 372 aaKnown RBP eCLIP4.31□□□□□ -1.72
SUB1-204ENST00000504016 YWHAQP27348 245 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 THPOP40225 353 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 TUBP50607 506 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 CLCN5P51795 746 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 ARSFP54793 590 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 GAS1P54826 345 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 ROR2Q01974 943 aaKnown RBP4.31□□□□□ -1.72
SUB1-204ENST00000504016 TBC1D9BQ66K14 1250 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 CES5AQ6NT32 575 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 Q6ZSV7 163 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 BBS12Q6ZW61 710 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 CUZD1Q86UP6 607 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 HEATR4Q86WZ0 1026 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 PALB2Q86YC2 1186 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 CADM3Q8N126 398 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 MIGA1Q8NAN2 632 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms