RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 MTA1Q13330 715 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 EIF4EBP2Q13542 120 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 AUHQ13825 339 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 EDRF1Q3B7T1 1238 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 C22orf39Q6P5X5 142 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 DPY19L3Q6ZPD9 716 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 FSTL5Q8N475 847 aaPredicted RBP16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 OR6C4Q8NGE1 309 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 ASB12Q8WXK4 309 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 CMKLR1Q99788 373 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 SLC12A9Q9BXP2 914 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 TNKS2Q9H2K2 1166 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 FAM204AQ9H8W3 233 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 FOXJ2Q9P0K8 574 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 SIRPGQ9P1W8 387 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 VPS51Q9UID3 782 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 NBASA2RRP1 2371 aa16.12■□□□□ 0.17
PDLIM7-210ENST00000503827 RELNP78509 3460 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 RNF225M0QZC1 329 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 AGRPO00253 132 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 CETN3O15182 167 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 TSPAN6O43657 245 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 RHOCP08134 193 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 ALPIP09923 528 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 ETV5P41161 510 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 BLKP51451 505 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 IRAK1P51617 712 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 CDH4P55283 916 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 YPEL5P62699 121 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 PITX1P78337 314 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 PPARDQ03181 441 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 ELOCQ15369 112 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 ZCWPW2Q504Y3 356 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 TMEM164Q5U3C3 297 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 LVRNQ6Q4G3 990 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 KYQ8NBH2 561 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 INTS4Q96HW7 963 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 MED15Q96RN5 788 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 PSMB7Q99436 277 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 DDIT4Q9NX09 232 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 WASF2Q9Y6W5 498 aa16.11■□□□□ 0.17
PDLIM7-210ENST00000503827 UTP20O75691 2785 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 C9orf172C9J069 976 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 NEMP1O14524 444 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 ENDOD1O94919 500 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 GPD2P43304 727 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 CCR10P46092 362 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 CDK17Q00537 523 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 ZFP36L1Q07352 338 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 LINGO4Q6UY18 593 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 MACC1Q6ZN28 852 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 PCDH19Q8TAB3 1148 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 HEPHQ9BQS7 1158 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 B3GNT4Q9C0J1 378 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 THAP9Q9H5L6 903 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 PNMA8BQ9ULN7 279 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 NOTCH2Q04721 2471 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 SDK2Q58EX2 2172 aa16.1■□□□□ 0.17
PDLIM7-210ENST00000503827 CHD5Q8TDI0 1954 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 ICE1Q9Y2F5 2266 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 NBPF19A0A087WUL8 3843 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 STMND1H3BQB6 276 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 TOR1BO14657 336 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 CALCAP01258 141 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 CELA2BP08218 269 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 CTSEP14091 401 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 EIF4A3P38919 411 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 ATP1A2P50993 1020 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 PARS2Q7L3T8 475 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 CCNJLQ8IV13 435 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 DCAF4L2Q8NA75 395 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 JPH3Q8WXH2 748 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 RAB7BQ96AH8 199 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 CENPTQ96BT3 561 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 KCNK4Q9NYG8 393 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 GPR34Q9UPC5 381 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 HS3ST4Q9Y661 456 aa16.09■□□□□ 0.17
PDLIM7-210ENST00000503827 LRP4O75096 1905 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 IGFALSP35858 605 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 GGCXP38435 758 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 DNA2P51530 1060 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 C5orf22Q49AR2 442 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 HIST2H2BCQ6DN03 193 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 SETD3Q86TU7 594 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 ATCAYQ86WG3 371 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 GKN2Q86XP6 184 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 PPM1KQ8N3J5 372 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 Q8N9G6 341 aaPredicted RBP16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 STK32AQ8WU08 396 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 NT5C1BQ96P26 610 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 CATSPER2Q96P56 530 aa16.08■□□□□ 0.16
PDLIM7-210ENST00000503827 SLC4A5Q9BY07 1137 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms