RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 CLCN4P51793 760 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 PDK4Q16654 411 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 TEDDM1Q5T9Z0 273 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 PDPK2PQ6A1A2 396 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 KCNMB4Q86W47 210 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 HJURPQ8NCD3 748 aaPredicted RBP22.29■■□□□ 1.16
PTPN13-205ENST00000502971 ACMSDQ8TDX5 336 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 PRKD2Q9BZL6 878 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 C20orf96Q9NUD7 363 aaPredicted RBP22.29■■□□□ 1.16
PTPN13-205ENST00000502971 NSMCE4AQ9NXX6 385 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 FGF19O95750 216 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 ALADP13716 330 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 DNAJB1P25685 340 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 BMP8BP34820 402 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 ZXDBP98169 803 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 POU6F1Q14863 301 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 SLC14A2Q15849 920 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 CXorf57Q6NSI4 855 aaKnown RBP22.28■■□□□ 1.16
PTPN13-205ENST00000502971 HTR3DQ70Z44 454 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 MAB21L3Q8N8X9 362 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 RANBP9Q96S59 729 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 SEMA3CQ99985 751 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 SLC17A6Q9P2U8 582 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 TBL1XO60907 577 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 CKMP06732 381 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 ITGA2BP08514 1039 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 TAC1P20366 129 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 FOXN2P32314 431 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 SERPINH1P50454 418 aaKnown RBP22.28■■□□□ 1.16
PTPN13-205ENST00000502971 HSP90AA5PQ58FG0 334 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 RNF219Q5W0B1 726 aaPredicted RBP22.28■■□□□ 1.16
PTPN13-205ENST00000502971 PIGWQ7Z7B1 504 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 TMA16Q96EY4 203 aaKnown RBP22.28■■□□□ 1.16
PTPN13-205ENST00000502971 SEC16BQ96JE7 1060 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 PSKH2Q96QS6 385 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 MGME1Q9BQP7 344 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 CORO1BQ9BR76 489 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 CINPQ9BW66 212 aaPredicted RBP22.28■■□□□ 1.16
PTPN13-205ENST00000502971 IQCGQ9H095 443 aaKnown RBP22.28■■□□□ 1.16
PTPN13-205ENST00000502971 IL1RAPL1Q9NZN1 696 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 PSAT1Q9Y617 370 aa22.28■■□□□ 1.16
PTPN13-205ENST00000502971 LOC285095A0A1B0GVY8 99 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 A0A1W2PRU2 124 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 RB1P06400 928 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 MYL4P12829 197 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 SPRP35270 261 aaPredicted RBP22.27■■□□□ 1.16
PTPN13-205ENST00000502971 MICALCLQ6ZW33 695 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 KDELC2Q7Z4H8 507 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 CACNA2D3Q8IZS8 1091 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 SRPK1Q96SB4 655 aaKnown RBP22.27■■□□□ 1.16
PTPN13-205ENST00000502971 RBBP8Q99708 897 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 C17orf80Q9BSJ5 609 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 VPS11Q9H270 941 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 SLC17A7Q9P2U7 560 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 GRID1Q9ULK0 1009 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 SH3BP1Q9Y3L3 701 aa22.27■■□□□ 1.16
PTPN13-205ENST00000502971 DENND4CQ5VZ89 1909 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 HEATR9A2RTY3 570 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 H0Y626 953 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CCL16O15467 120 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 EPOP01588 193 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 PAMP19021 973 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CHRNA4P43681 627 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CSE1LP55060 971 aaKnown RBP22.26■■□□□ 1.15
PTPN13-205ENST00000502971 STRA8Q7Z7C7 330 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CPXM2Q8N436 756 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 SLC25A41Q8N5S1 370 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 MICAL1Q8TDZ2 1067 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 SLC22A17Q8WUG5 538 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 FEM1CQ96JP0 617 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 ZNF778Q96MU6 729 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 SAMD11Q96NU1 681 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 MUC3BQ9H195 1237 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.26■■□□□ 1.15
PTPN13-205ENST00000502971 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.26■■□□□ 1.15
PTPN13-205ENST00000502971 MUSKO15146 869 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 LUC7L3O95232 432 aaKnown RBP22.26■■□□□ 1.15
PTPN13-205ENST00000502971 DHRS4L1P0CG22 281 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CES1P23141 567 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 DDX6P26196 483 aaKnown RBP eCLIP22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CRHR1P34998 444 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 ETV4P43268 484 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 EPHA5P54756 1037 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 IHHQ14623 411 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CARNMT1Q8N4J0 409 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 LRRC8CQ8TDW0 803 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 AGAP2Q99490 1192 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 IARS2Q9NSE4 1012 aaKnown RBP22.26■■□□□ 1.15
PTPN13-205ENST00000502971 TREX1Q9NSU2 369 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 CFAP97Q9P2B7 532 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 PLLPQ9Y342 182 aa22.26■■□□□ 1.15
PTPN13-205ENST00000502971 SERPINF2P08697 491 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 HLA-DPA1P20036 260 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 LIMK2P53671 638 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 PDE1BQ01064 536 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 MSLNQ13421 630 aaPredicted RBP22.25■■□□□ 1.15
PTPN13-205ENST00000502971 KIAA0930Q6ICG6 404 aaPredicted RBP22.25■■□□□ 1.15
PTPN13-205ENST00000502971 CNTN4Q8IWV2 1026 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 NDUFAF2Q8N183 169 aa22.25■■□□□ 1.15
PTPN13-205ENST00000502971 IFT43Q96FT9 208 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms