RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 SRGAP2O75044 1071 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 RNF8O76064 485 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 UNC5CO95185 931 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 LINGO3P0C6S8 592 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TMEM191BP0C7N4 346 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 THEGLP0DJG4 465 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TCF3P15923 654 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CD44P16070 742 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 ITGB6P18564 788 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 PRKCHP24723 683 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 YWHAQP27348 245 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 EPHA8P29322 1005 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 HPDP32754 393 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 MAGEA1P43355 309 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 LSSP48449 732 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CARSP49589 748 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 SERPINB8P50452 374 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SEC24CP53992 1094 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 INHBCP55103 352 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 NCALDP61601 193 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 RACK1P63244 317 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 RBP5P82980 135 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 DEUP1Q05D60 604 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CYP24A1Q07973 514 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CLN3Q13286 438 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ILKQ13418 452 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 HLTFQ14527 1009 aaKnown RBP eCLIP5.3□□□□□ -1.56
HTT-202ENST00000502820 ZNF234Q14588 700 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 PSMD6Q15008 389 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SHBQ15464 509 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SURF1Q15526 300 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SNRNP35Q16560 246 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 MAN2A1Q16706 1144 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 GEN1Q17RS7 908 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 KNOP1Q1ED39 458 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 DUOXA2Q1HG44 320 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SOWAHAQ2M3V2 549 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ARL13BQ3SXY8 428 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 POM121L1PQ3SYA9 428 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 MDH1BQ5I0G3 518 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 HECTD3Q5T447 861 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ACBD5Q5T8D3 534 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 DENND2CQ68D51 928 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 KCTD16Q68DU8 428 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TTI2Q6NXR4 508 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 PPP1R21Q6ZMI0 780 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ASRGL1Q7L266 308 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TRIM74Q86UV6 250 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TRIM73Q86UV7 250 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 VPS36Q86VN1 386 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 OSTM1Q86WC4 334 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 NELFCDQ8IXH7 590 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 GSPT2Q8IYD1 628 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 GRAMD1CQ8IYS0 662 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ADGRF2Q8IZF7 708 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ARHGAP24Q8N264 748 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 RASGEF1CQ8N431 466 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 RIBC1Q8N443 379 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 ARL14Q8N4G2 192 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SH2D3CQ8N5H7 860 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CSGALNACT2Q8N6G5 542 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TOP6BLQ8N6T0 577 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ZSCAN1Q8NBB4 408 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 RBBP8NLQ8NC74 664 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 KIAA0895Q8NCT3 520 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 PPFIBP2Q8ND30 876 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 C1orf216Q8TAB5 229 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 STK32AQ8WU08 396 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CYB5D2Q8WUJ1 264 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 KBTBD7Q8WVZ9 684 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 DYDC1Q8WWB3 177 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SGF29Q96ES7 293 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 THOC1Q96FV9 657 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 ATXN7L3BQ96GX2 97 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ANKRD36BP1Q96IX9 119 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SERAC1Q96JX3 654 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 PLEKHG4BQ96PX9 1271 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 FMO2Q99518 471 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 SYT15Q9BQS2 421 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 ACBD6Q9BR61 282 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CENPKQ9BS16 269 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 MED10Q9BTT4 135 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 YIPF3Q9GZM5 350 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 LACRTQ9GZZ8 138 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 XYLT2Q9H1B5 865 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 VPS16Q9H269 839 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 BLZF1Q9H2G9 400 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 PABPC3Q9H361 631 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 MMADHCQ9H3L0 296 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 EPB41L1Q9H4G0 881 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 METTL14Q9HCE5 456 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 ZNF71Q9NQZ8 489 aaPredicted RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 INTS9Q9NV88 658 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 DMAC2Q9NW81 257 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 KLHL14Q9P2G3 628 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 LSM7Q9UK45 103 aaKnown RBP5.3□□□□□ -1.56
HTT-202ENST00000502820 WDR37Q9Y2I8 494 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 CAPN6Q9Y6Q1 641 aa5.3□□□□□ -1.56
HTT-202ENST00000502820 TSC2P49815 1807 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms