RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 SEMA3CQ99985 751 aa12.9□□□□□ -0.34
LMNA-218ENST00000502357 CCDC3Q9BQI4 270 aa12.9□□□□□ -0.34
LMNA-218ENST00000502357 C2orf49Q9BVC5 232 aaPredicted RBP12.9□□□□□ -0.34
LMNA-218ENST00000502357 NCKIPSDQ9NZQ3 722 aa12.9□□□□□ -0.34
LMNA-218ENST00000502357 MPP6Q9NZW5 540 aa12.9□□□□□ -0.34
LMNA-218ENST00000502357 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
LMNA-218ENST00000502357 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
LMNA-218ENST00000502357 LMO7DNF2Z398 122 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 AREL1O15033 823 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 DAB1O75553 588 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 ENDOD1O94919 500 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 RHOCP08134 193 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 UGT1A5P35504 534 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 IGFALSP35858 605 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 ADKP55263 362 aaKnown RBP12.89□□□□□ -0.35
LMNA-218ENST00000502357 CCDC15Q0P6D6 951 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
LMNA-218ENST00000502357 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 PTPN20Q4JDL3 420 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 EFHC1Q5JVL4 640 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 TRNP1Q6NT89 227 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 GJB7Q6PEY0 223 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 FOXR2Q6PJQ5 311 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 XKR5Q6UX68 686 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 PRICKLE2Q7Z3G6 844 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 ARL14Q8N4G2 192 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 C1orf74Q96LT6 269 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 CEP44Q9C0F1 390 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 INTS2Q9H0H0 1204 aaKnown RBP12.89□□□□□ -0.35
LMNA-218ENST00000502357 SIK2Q9H0K1 926 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 EVA1BQ9NVM1 165 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 PADI4Q9UM07 663 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
LMNA-218ENST00000502357 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
LMNA-218ENST00000502357 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 H3BM21 787 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 M0QYT0 321 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 PLD2O14939 933 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 THAP12O43422 761 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 MED7O43513 233 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 ITGB2P05107 769 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 TSHRP16473 764 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 GNA15P30679 374 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 GKP32189 559 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 NOS2P35228 1153 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 SERPINH1P50454 418 aaKnown RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 CCNHP51946 323 aaPredicted RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 APBA1Q02410 837 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 NME3Q13232 169 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 MTA1Q13330 715 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 CARD16Q5EG05 197 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 FOXR1Q6PIV2 292 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 DTX1Q86Y01 620 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 PHACTR4Q8IZ21 702 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 PCDH20Q8N6Y1 951 aaKnown RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 DENND6BQ8NEG7 585 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 WDR48Q8TAF3 677 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 HTR3CQ8WXA8 447 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 EXTL1Q92935 676 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 RNF34Q969K3 372 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 SGF29Q96ES7 293 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 DHTKD1Q96HY7 919 aaPredicted RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 PPP1R13BQ96KQ4 1090 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 CCDC114Q96M63 670 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 TKTL2Q9H0I9 626 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 DYRK4Q9NR20 520 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
LMNA-218ENST00000502357 AJAP1Q9UKB5 411 aaPredicted RBP12.88□□□□□ -0.35
LMNA-218ENST00000502357 NBPF19A0A087WUL8 3843 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 ILVBLA1L0T0 632 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 FPGTO14772 594 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 TSPAN6O43657 245 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 KRT5P13647 590 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 HGFP14210 728 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 SLC6A3Q01959 620 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 DPY19L2P1Q6NXN4 242 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 CLEC18BQ6UXF7 455 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 C11orf57Q6ZUT1 292 aaPredicted RBP12.87□□□□□ -0.35
LMNA-218ENST00000502357 TFAP2DQ7Z6R9 452 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 TP53I13Q8NBR0 393 aaPredicted RBP12.87□□□□□ -0.35
LMNA-218ENST00000502357 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 NAT6Q93015 286 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 FUBP1Q96AE4 644 aaKnown RBP12.87□□□□□ -0.35
LMNA-218ENST00000502357 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
LMNA-218ENST00000502357 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms