RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 INPP5FQ9Y2H2 1132 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 TCAF1Q9Y4C2 921 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 M0QZQ0 153 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 GPR182O15218 404 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 MATN3O15232 486 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 DLX3O60479 287 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ANXA9O76027 345 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 MOCS2O96007 188 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-204ENST00000501271 PIK3R1P27986 724 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 MTTPP55157 894 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 RAB10P61026 200 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 NSUN2Q08J23 767 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLIP1-204ENST00000501271 CNGA3Q16281 694 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 NOMO2Q5JPE7 1267 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 BRMS1LQ5PSV4 323 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 BTBD8Q5XKL5 378 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 OR52E8Q6IFG1 317 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 C17orf99Q6UX52 265 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 BEND5Q7L4P6 421 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 SCD5Q86SK9 330 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 PHC3Q8NDX5 983 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 RSPH1Q8WYR4 309 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 NXNL1Q96CM4 212 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 MRGPRX2Q96LB1 330 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 NMUR1Q9HB89 426 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ABCC13Q9NSE7 274 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 MPP6Q9NZW5 540 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ADAMTS6Q9UKP5 1117 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 PACSIN3Q9UKS6 424 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 G3BP2Q9UN86 482 aaKnown RBP9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ACOT9Q9Y305 439 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 TNFRSF10BO14763 440 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 AURKAO14965 403 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 FGF10O15520 208 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-204ENST00000501271 DDHD2O94830 711 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 OR4Q2P0C623 313 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 UBTFL6P0CB48 400 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-204ENST00000501271 TFEBP19484 476 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 CTGFP29279 349 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 CCR1P32246 355 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ASPHQ12797 758 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 UGP2Q16851 508 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 LRRC36Q1X8D7 754 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 LPCAT4Q643R3 524 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 TMEM198Q66K66 360 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF470Q6ECI4 717 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 C14orf80Q86SX3 495 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 SNX32Q86XE0 403 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 JADE3Q92613 823 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 CNDP1Q96KN2 507 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 OMDQ99983 421 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 FSD1LQ9BXM9 530 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 TRPV6Q9H1D0 765 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF385DQ9H6B1 395 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 CATSPERBQ9H7T0 1116 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 TREX1Q9NSU2 369 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 RBM22Q9NW64 420 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLIP1-204ENST00000501271 SCOCQ9UIL1 159 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 HTTP42858 3142 aa9.98□□□□□ -0.81
CLIP1-204ENST00000501271 TMEM233B4DJY2 109 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 E9PAM4 449 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 TNPO2O14787 897 aaKnown RBP9.97□□□□□ -0.81
CLIP1-204ENST00000501271 AIM2O14862 343 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF623O75123 536 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 COL6A2P12110 1019 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 STMN1P16949 149 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 THPOP40225 353 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 NUDT2P50583 147 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 PAPOLAP51003 745 aaKnown RBP9.97□□□□□ -0.81
CLIP1-204ENST00000501271 GEMP55040 296 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 TAS2R39P59534 338 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 PRKAA1Q13131 559 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 SEPT6Q14141 434 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 CST9Q5W186 159 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 AFMIDQ63HM1 303 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF280DQ6N043 979 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 POTEHQ6S545 545 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 LCA5Q86VQ0 697 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 SOCS4Q8WXH5 440 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 IFT43Q96FT9 208 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 ELMO2Q96JJ3 720 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 MARK4Q96L34 752 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 TRIM62Q9BVG3 475 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 VCXQ9H320 206 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 SLC24A3Q9HC58 644 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 OSER1Q9NX31 292 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 DSEQ9UL01 958 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 HS3ST4Q9Y661 456 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 PLXNA3P51805 1871 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 H3BNX3 289 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 RAG1P15918 1043 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 PEX2P28328 305 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 GRIK1P39086 918 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 PEX19P40855 299 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 CCNHP51946 323 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-204ENST00000501271 PRKAA2P54646 552 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 HUNKP57058 714 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 GRIK3Q13003 919 aa9.97□□□□□ -0.81
CLIP1-204ENST00000501271 TUSC3Q13454 348 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms