RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 AP1G1O43747 822 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 GCATO75600 419 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 TCEA3O75764 348 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 TNFSF15O95150 251 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 GNA14O95837 355 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 SLC9A1P19634 815 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 OR1E1P30953 314 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 ABL2P42684 1182 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 SULT1E1P49888 294 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 DNA2P51530 1060 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 CCNHP51946 323 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 PFN3P60673 137 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 ARF5P84085 180 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 KCNC4Q03721 635 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 ZSCAN23Q3MJ62 389 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 CCDC81Q6ZN84 652 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 SLC35F3Q8IY50 421 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 PCDH20Q8N6Y1 951 aaKnown RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 ZNF397Q8NF99 534 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 TPCN2Q8NHX9 752 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 SHC3Q92529 594 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 TIGD1Q96MW7 591 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 LENG8Q96PV6 779 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 HEPHQ9BQS7 1158 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 SPON2Q9BUD6 331 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 C1QTNF2Q9BXJ5 285 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 CEP44Q9C0F1 390 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 ZDHHC6Q9H6R6 413 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 PLCB1Q9NQ66 1216 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 HOOK1Q9UJC3 728 aaKnown RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 AJAP1Q9UKB5 411 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 FCF1Q9Y324 198 aaKnown RBP14.97□□□□□ -0.01
TRAF4-212ENST00000498540 GKP32189 559 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 RNASE9P60153 205 aaKnown RBP14.96□□□□□ -0.01
TRAF4-212ENST00000498540 SGCGQ13326 291 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 C1orf61Q13536 156 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 CARD16Q5EG05 197 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 PRRT3Q5FWE3 981 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 LRRC31Q6UY01 552 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 ARL14Q8N4G2 192 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 OR6K2Q8NGY2 324 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 WDR36Q8NI36 951 aaKnown RBP14.96□□□□□ -0.01
TRAF4-212ENST00000498540 NT5C3BQ969T7 300 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 TBCBQ99426 244 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 CCDC3Q9BQI4 270 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 LRRC61Q9BV99 259 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 TM6SF2Q9BZW4 377 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 SYNCQ9H7C4 482 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 SYNDIG1Q9H7V2 258 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 ATP13A1Q9HD20 1204 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 RRN3Q9NYV6 651 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAF4-212ENST00000498540 SPASTQ9UBP0 616 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 APEX2Q9UBZ4 518 aa14.96□□□□□ -0.01
TRAF4-212ENST00000498540 APOBEC3BQ9UH17 382 aaKnown RBP14.96□□□□□ -0.01
TRAF4-212ENST00000498540 CHD5Q8TDI0 1954 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 CCDC187A0A096LP49 1063 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 FAM170AA1A519 330 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 ILVBLA1L0T0 632 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 BIN1O00499 593 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 RIOK3O14730 519 aaKnown RBP14.95□□□□□ -0.02
TRAF4-212ENST00000498540 ARHGAP6O43182 974 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 WISP1O95388 367 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 CD160O95971 181 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 PNMA6AP0CW24 399 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-212ENST00000498540 ADKP55263 362 aaKnown RBP14.95□□□□□ -0.02
TRAF4-212ENST00000498540 DEUP1Q05D60 604 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 PAK1Q13153 545 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 MORC3Q14149 939 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 ARL13BQ3SXY8 428 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 C6orf132Q5T0Z8 1188 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 RETSATQ6NUM9 610 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 PRICKLE2Q7Z3G6 844 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 PHACTR4Q8IZ21 702 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 EXD3Q8N9H8 876 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 DENND6BQ8NEG7 585 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 PGAP3Q96FM1 320 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-212ENST00000498540 C1orf74Q96LT6 269 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 STAP1Q9ULZ2 295 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 BOD1L1Q8NFC6 3051 aa14.95□□□□□ -0.02
TRAF4-212ENST00000498540 SPTA1P02549 2419 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 C16orf96A6NNT2 1141 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 LMO7DNF2Z398 122 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 NEMP1O14524 444 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 EFSO43281 561 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 TSPAN6O43657 245 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 CELA2BP08218 269 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-212ENST00000498540 ITGA2BP08514 1039 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 IGFALSP35858 605 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 MLLT3P42568 568 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-212ENST00000498540 GNA12Q03113 381 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 PTK2Q05397 1052 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 SPIDRQ14159 915 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 B3GNT8Q7Z7M8 397 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 SLC47A2Q86VL8 602 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 ZSCAN30Q86W11 494 aa14.94□□□□□ -0.02
TRAF4-212ENST00000498540 DRC7Q8IY82 874 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms