RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 FCF1Q9Y324 198 aaKnown RBP16.37■□□□□ 0.21
MUC1-220ENST00000498431 CDRT15L2A8MXV6 281 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 H3BM21 787 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 K7ENP7 123 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 MUSKO15146 869 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 GCATO75600 419 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 CD160O95971 181 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 OR1E1P30953 314 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 GKP32189 559 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 ABL2P42684 1182 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 RABIFP47224 123 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 SERPINH1P50454 418 aaKnown RBP16.36■□□□□ 0.21
MUC1-220ENST00000498431 PDX1P52945 283 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 ARF5P84085 180 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 DEUP1Q05D60 604 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 INO80CQ6PI98 192 aaPredicted RBP16.36■□□□□ 0.21
MUC1-220ENST00000498431 RBM44Q6ZP01 1051 aaKnown RBP16.36■□□□□ 0.21
MUC1-220ENST00000498431 SLC47A2Q86VL8 602 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 NT5C3BQ969T7 300 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 VOPP1Q96AW1 172 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 HEPHQ9BQS7 1158 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 C1QTNF2Q9BXJ5 285 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 ZDHHC6Q9H6R6 413 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.36■□□□□ 0.21
MUC1-220ENST00000498431 IPO11Q9UI26 975 aaKnown RBP16.36■□□□□ 0.21
MUC1-220ENST00000498431 SALL4Q9UJQ4 1053 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 PCDHGA8Q9Y5G5 932 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 NAV2Q8IVL1 2488 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 BSNQ9UPA5 3926 aa16.36■□□□□ 0.21
MUC1-220ENST00000498431 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 FPGTO14772 594 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 AP1G1O43747 822 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 SRGAP2O75044 1071 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 CLCN1P35523 988 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 PFN3P60673 137 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 C1orf61Q13536 156 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 NR0B2Q15466 257 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 CARD16Q5EG05 197 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 TRNP1Q6NT89 227 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 LRRC31Q6UY01 552 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 ELOA2Q8IYF1 753 aaPredicted RBP16.35■□□□□ 0.21
MUC1-220ENST00000498431 PCDH20Q8N6Y1 951 aaKnown RBP16.35■□□□□ 0.21
MUC1-220ENST00000498431 OR6K2Q8NGY2 324 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 PGAP3Q96FM1 320 aaPredicted RBP16.35■□□□□ 0.21
MUC1-220ENST00000498431 MED8Q96G25 268 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 C1orf74Q96LT6 269 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 LENG8Q96PV6 779 aaPredicted RBP16.35■□□□□ 0.21
MUC1-220ENST00000498431 IL12RB2Q99665 862 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 BOCQ9BWV1 1114 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 TM6SF2Q9BZW4 377 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 ATP13A1Q9HD20 1204 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 RRN3Q9NYV6 651 aa16.35■□□□□ 0.21
MUC1-220ENST00000498431 PON1P27169 355 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 KRT9P35527 623 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 PTK2Q05397 1052 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 CLN3Q13286 438 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 SGCGQ13326 291 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 PRRT3Q5FWE3 981 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 RETSATQ6NUM9 610 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 DRC7Q8IY82 874 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 GRAMD1AQ96CP6 724 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 CEP44Q9C0F1 390 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 CLPBQ9H078 707 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 SIX2Q9NPC8 291 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 NCKIPSDQ9NZQ3 722 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 APOBEC3BQ9UH17 382 aaKnown RBP16.34■□□□□ 0.21
MUC1-220ENST00000498431 STAP1Q9ULZ2 295 aa16.34■□□□□ 0.21
MUC1-220ENST00000498431 C16orf96A6NNT2 1141 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 FOXN3O00409 490 aaPredicted RBP16.33■□□□□ 0.2
MUC1-220ENST00000498431 TPP1O14773 563 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 EFSO43281 561 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 TCEA3O75764 348 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 TNFSF15O95150 251 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 CELA2BP08218 269 aaPredicted RBP16.33■□□□□ 0.2
MUC1-220ENST00000498431 IGFALSP35858 605 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 FLT3P36888 993 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 ACVRL1P37023 503 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
MUC1-220ENST00000498431 GNA12Q03113 381 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 EXOC3L4Q17RC7 722 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 SLC25A52Q3SY17 297 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 C2CD6Q53TS8 623 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 LRRC73Q5JTD7 316 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 GBP6Q6ZN66 633 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 CLEC14AQ86T13 490 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 WDR36Q8NI36 951 aaKnown RBP16.33■□□□□ 0.2
MUC1-220ENST00000498431 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 CCDC3Q9BQI4 270 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 LRRC61Q9BV99 259 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 CLMPQ9H6B4 373 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 NDFIP2Q9NV92 336 aa16.33■□□□□ 0.2
MUC1-220ENST00000498431 HECAQ9UBI9 543 aaPredicted RBP16.33■□□□□ 0.2
MUC1-220ENST00000498431 TSPAN6O43657 245 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 SLC28A2O43868 658 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms