RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DR1Q01658 176 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ENPP2Q13822 863 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-227ENST00000498056 TEX44Q53QW1 395 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CARD16Q5EG05 197 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 FAXCQ5TGI0 409 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 KIAA1211LQ6NV74 962 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 DPY19L3Q6ZPD9 716 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 PID1Q7Z2X4 250 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ZNF572Q7Z3I7 529 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CTAGE6Q86UF2 777 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CTAGE4Q8IX94 777 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 STK40Q8N2I9 435 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 PAF1Q8N7H5 531 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 GLIS1Q8NBF1 620 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CHST14Q8NCH0 376 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 OR8D1Q8WZ84 308 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 PTPRN2Q92932 1015 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 ISG20Q96AZ6 181 aaKnown RBP13.76□□□□□ -0.21
CPNE1-227ENST00000498056 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 SEMA3CQ99985 751 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 GBA3Q9H227 469 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 CHRDQ9H2X0 955 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 USP29Q9HBJ7 922 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 AMACRQ9UHK6 382 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 TRHDEQ9UKU6 1024 aa13.76□□□□□ -0.21
CPNE1-227ENST00000498056 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-227ENST00000498056 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 TP53BP1Q12888 1972 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-227ENST00000498056 TCRBV21S2A2A0A5A6 115 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 TNFRSF10AO00220 468 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 INSIG1O15503 277 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ATG13O75143 517 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ZNF821O75541 412 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-227ENST00000498056 PIGNO95427 931 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ZSCAN5DPP0CG00 497 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ETS1P14921 441 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 AOC1P19801 751 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 GKP32189 559 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 AP1S1P61966 158 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 GAS6Q14393 721 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ELAVL3Q14576 367 aaKnown RBP13.75□□□□□ -0.21
CPNE1-227ENST00000498056 P3H1Q32P28 736 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 C8orf74Q6P047 294 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 OR2A12Q8NGT7 310 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ATL2Q8NHH9 583 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 RTP4Q96DX8 246 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 TEKT5Q96M29 485 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 NUDCD1Q96RS6 583 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 COL25A1Q9BXS0 654 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-227ENST00000498056 GLOD4Q9HC38 313 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 PCDH9Q9HC56 1237 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 PRSS16Q9NQE7 514 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 HECAQ9UBI9 543 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-227ENST00000498056 SUN2Q9UH99 717 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 IL36AQ9UHA7 158 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ASIC3Q9UHC3 531 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 DRG1Q9Y295 367 aaKnown RBP13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 PLXNA2O75051 1894 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ZDBF2Q9HCK1 2354 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 NUMA1Q14980 2115 aa13.75□□□□□ -0.21
CPNE1-227ENST00000498056 ZNF106Q9H2Y7 1883 aaKnown RBP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 FAM86C2PA6NEL3 165 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 C5orf60A6NFR6 353 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CHURC1-FNTBB4DL54 471 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 TTI1O43156 1089 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 KRT14P02533 472 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 STIP1P31948 543 aaKnown RBP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CD68P34810 354 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CD86P42081 329 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 MAGEA9P43362 315 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 MAPK8P45983 427 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 RPS9P46781 194 aaKnown RBP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 TERF1P54274 439 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 BASP1P80723 227 aaKnown RBP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 RAD51Q06609 339 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 FZD5Q13467 585 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CAMK2GQ13555 558 aaPredicted RBP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CRY1Q16526 586 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 PCSK7Q16549 785 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 POM121L1PQ3SYA9 428 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CFAP58Q5T655 872 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 C9orf64Q5T6V5 341 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 SRLQ86TD4 932 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 JAMLQ86YT9 394 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 PBXIP1Q96AQ6 731 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 CLDN23Q96B33 292 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 HHIPQ96QV1 700 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 RBM15Q96T37 977 aaKnown RBP eCLIP13.74□□□□□ -0.213e-7■□□□□ 9.8
CPNE1-227ENST00000498056 TRIM51Q9BSJ1 452 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms