RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 UBTD1Q9HAC8 227 aa4.01□□□□□ -1.77
SMC4-227ENST00000497984 CYP4B1P13584 511 aa4□□□□□ -1.77
SMC4-227ENST00000497984 GM2AP17900 193 aa4□□□□□ -1.77
SMC4-227ENST00000497984 CYP4A11Q02928 519 aa4□□□□□ -1.77
SMC4-227ENST00000497984 PTK2BQ14289 1009 aa4□□□□□ -1.77
SMC4-227ENST00000497984 ATPAF1Q5TC12 328 aaPredicted RBP4□□□□□ -1.77
SMC4-227ENST00000497984 FAM69BQ5VUD6 431 aa4□□□□□ -1.77
SMC4-227ENST00000497984 NCAPH2Q6IBW4 605 aa4□□□□□ -1.77
SMC4-227ENST00000497984 TUBA1AQ71U36 451 aa4□□□□□ -1.77
SMC4-227ENST00000497984 MARK2Q7KZI7 788 aaKnown RBP4□□□□□ -1.77
SMC4-227ENST00000497984 BRSK2Q8IWQ3 736 aa4□□□□□ -1.77
SMC4-227ENST00000497984 SYTL1Q8IYJ3 562 aa4□□□□□ -1.77
SMC4-227ENST00000497984 OR4N2Q8NGD1 307 aa4□□□□□ -1.77
SMC4-227ENST00000497984 SECTM1Q8WVN6 248 aa4□□□□□ -1.77
SMC4-227ENST00000497984 CD101Q93033 1021 aa4□□□□□ -1.77
SMC4-227ENST00000497984 EID2BQ96D98 161 aa4□□□□□ -1.77
SMC4-227ENST00000497984 TNIP3Q96KP6 325 aa4□□□□□ -1.77
SMC4-227ENST00000497984 TUBA1CQ9BQE3 449 aa4□□□□□ -1.77
SMC4-227ENST00000497984 CLPBQ9H078 707 aa4□□□□□ -1.77
SMC4-227ENST00000497984 MVB12BQ9H7P6 319 aa4□□□□□ -1.77
SMC4-227ENST00000497984 TMEM51Q9NW97 253 aa4□□□□□ -1.77
SMC4-227ENST00000497984 GRHL1Q9NZI5 618 aa4□□□□□ -1.77
SMC4-227ENST00000497984 GAB2Q9UQC2 676 aa4□□□□□ -1.77
SMC4-227ENST00000497984 GOLGA6L3A6NEY3 463 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 J3KR12 359 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 CHL1O00533 1208 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 SYN3O14994 580 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 HNRNPRO43390 633 aaKnown RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 PLIN1O60240 522 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 CCNT1O60563 726 aaKnown RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 LDLRP01130 860 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 IGHV4-30-4P0DP06 118 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 ARSAP15289 507 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 YWHAQP27348 245 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 RPL3P39023 403 aaKnown RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 VEGFCP49767 419 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 RPS6KA3P51812 740 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 PNLIPRP1P54315 467 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 DMP1Q13316 513 aaPredicted RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 CCDC6Q16204 474 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 IL31Q6EBC2 164 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 UNQ6126/PRO20091Q6UXV3 157 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 AADATQ8N5Z0 425 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 PTGR2Q8N8N7 351 aaPredicted RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 IL17RCQ8NAC3 791 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 ATOH1Q92858 354 aaPredicted RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 SGCZQ96LD1 299 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 ZNF385AQ96PM9 386 aaKnown RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 ELAC2Q9BQ52 826 aaKnown RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 KATNAL1Q9BW62 490 aa3.99□□□□□ -1.77
SMC4-227ENST00000497984 HERC5Q9UII4 1024 aaKnown RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 C19orf53Q9UNZ5 99 aaPredicted RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 MORC2Q9Y6X9 1032 aaPredicted RBP3.99□□□□□ -1.77
SMC4-227ENST00000497984 IGHV4OR15-8A0A075B7B6 117 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 KIF1CO43896 1103 aaKnown RBP3.98□□□□□ -1.77
SMC4-227ENST00000497984 PMS2P2O95744 297 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 CHN1P15882 459 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 SSTR2P30874 369 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 GPR12P47775 334 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 TAF6P49848 677 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 NEK3P51956 506 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 FAM27E3Q08E93 113 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 ST3GAL1Q11201 340 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 TROAPQ12815 778 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 DGAT2L7PQ6IED9 249 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 RAB11FIP2Q7L804 512 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 SLC44A2Q8IWA5 706 aaPredicted RBP3.98□□□□□ -1.77
SMC4-227ENST00000497984 FAM186BQ8IYM0 893 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 SVIPQ8NHG7 77 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 SCAMP5Q8TAC9 235 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 TMEM41AQ96HV5 264 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 BRD8Q9H0E9 1235 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 CXorf56Q9H5V9 222 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 ELAC1Q9H777 363 aaKnown RBP3.98□□□□□ -1.77
SMC4-227ENST00000497984 EBF2Q9HAK2 575 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 WDR6Q9NNW5 1121 aaKnown RBP3.98□□□□□ -1.77
SMC4-227ENST00000497984 OBP2BQ9NPH6 170 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 NLRC4Q9NPP4 1024 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 PRDM8Q9NQV8 689 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 PCDHAC2Q9Y5I4 1007 aa3.98□□□□□ -1.77
SMC4-227ENST00000497984 A0A096LPK6 155 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 FAM90A20PA6NIJ5 464 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 FAM157AC9JC47 383 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 ZG16O60844 167 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 ACTL6BO94805 426 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 VNN2O95498 520 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 ACP5P13686 325 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 SERPINA4P29622 427 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 SKIV2L2P42285 1042 aaKnown RBP3.97□□□□□ -1.77
SMC4-227ENST00000497984 STARD3Q14849 445 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 LRRC24Q50LG9 513 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 CCDC129Q6ZRS4 1044 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 FOXL2NBQ6ZUU3 175 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 SRLQ86TD4 932 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 KLHDC8BQ8IXV7 354 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 STT3BQ8TCJ2 826 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 TBC1D22AQ8WUA7 517 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 CPT1BQ92523 772 aa3.97□□□□□ -1.77
SMC4-227ENST00000497984 DDX23Q9BUQ8 820 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms