RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 DPYSL2Q16555 572 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 PARP15Q460N3 678 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 CARD16Q5EG05 197 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 ARSIQ5FYB1 569 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 KCNT1Q5JUK3 1230 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 PIP5KL1Q5T9C9 394 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 PAPD7Q5XG87 772 aaKnown RBP16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 AFMIDQ63HM1 303 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 ARRDC3Q96B67 414 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 CCDC114Q96M63 670 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 KDM4CQ9H3R0 1056 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
CTDSP1-214ENST00000497677 TNRC6BQ9UPQ9 1833 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 A0A1W2PPC4 97 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 ZSCAN5CA6NGD5 496 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 MYO1FO00160 1098 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 LATO43561 262 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 BUB1O43683 1085 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 LEFTY1O75610 366 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 MTA2O94776 668 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 PRNPP04156 253 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 RARAP10276 462 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 CCNHP51946 323 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 ZNF135P52742 658 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 NDST2P52849 883 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 GEMIN4P57678 1058 aaKnown RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 SMTNL2Q2TAL5 461 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 PPP6R3Q5H9R7 873 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 POLNQ7Z5Q5 900 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 CPNE8Q86YQ8 564 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 ARHGAP12Q8IWW6 846 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 OR2I1PQ8NGU4 316 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 ZNF564Q8TBZ8 553 aaPredicted RBP16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 SNX19Q92543 992 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 HEPHQ9BQS7 1158 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 TM6SF2Q9BZW4 377 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 SLC39A8Q9C0K1 460 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 PDFQ9HBH1 243 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 TM9SF3Q9HD45 589 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 DONSONQ9NYP3 566 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 IL36AQ9UHA7 158 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 CDC23Q9UJX2 597 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 TFR2Q9UP52 801 aa16.24■□□□□ 0.19
CTDSP1-214ENST00000497677 CACNA1AO00555 2505 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 GJB3O75712 270 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 TMCC1O94876 653 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 SYPP08247 313 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 TCP1P17987 556 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 MAPK8P45983 427 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 CSNK1EP49674 416 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 DNA2P51530 1060 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 PPP2CBP62714 309 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 PPP2CAP67775 309 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 GRIK2Q13002 908 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 WHAMMP3Q1A5X7 153 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 INO80DQ53TQ3 878 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 NPWQ8N729 165 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 NETO2Q8NC67 525 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 MYRIPQ8NFW9 859 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 SLC35G2Q8TBE7 412 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 GRIN3AQ8TCU5 1115 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 TEKT4Q8WW24 435 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 CELF6Q96J87 481 aaKnown RBP16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 HECAQ9UBI9 543 aaPredicted RBP16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 MRFAP1Q9Y605 127 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 SAR1BQ9Y6B6 198 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3DA0A087WVF3 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3IA0A087WXS9 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3EA0A087X179 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3KA0A087X1G2 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3FA6NER0 549 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3LB9A6J9 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 J3KR12 359 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 KPNA3O00505 521 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 WNT9AO14904 365 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 GSRP00390 522 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3HP0C7X1 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 IL4RP24394 825 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 GKP32189 559 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 PAPOLAP51003 745 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 ARSEP51690 589 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 CYTH1Q15438 398 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 MYLK3Q32MK0 819 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3GQ6DHY5 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3CQ6IPX1 549 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TP53INP2Q8IXH6 220 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TBC1D3Q8IZP1 549 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 MINDY1Q8N5J2 469 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 OR2AP1Q8NGE2 309 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TPCN2Q8NHX9 752 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 FAM71BQ8TC56 605 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 CASKIN2Q8WXE0 1202 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 TSC1Q92574 1164 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 HSPH1Q92598 858 aa16.22■□□□□ 0.19
CTDSP1-214ENST00000497677 GTPBP2Q9BX10 602 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms