RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ZFYVE27Q5T4F4 411 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 C11orf63Q6NUN7 778 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 RAD9BQ6WBX8 426 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 ARMCX6Q7L4S7 300 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 RHOT1Q8IXI2 618 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 KIAA2013Q8IYS2 634 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 RGL4Q8IZJ4 473 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 DEFB119Q8N690 84 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 NPWQ8N729 165 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 FAF2Q96CS3 445 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 CELF6Q96J87 481 aaKnown RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF599Q96NL3 588 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 OSBPL1AQ9BXW6 950 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 HDAC8Q9BY41 377 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 TM6SF2Q9BZW4 377 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 SP110Q9HB58 689 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 DDX56Q9NY93 547 aaKnown RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 HECAQ9UBI9 543 aaPredicted RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 IPO11Q9UI26 975 aaKnown RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 SARDHQ9UL12 918 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 DFFAO00273 331 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 KPNA3O00505 521 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 PLRG1O43660 514 aaKnown RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 SPOPO43791 374 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 BUB1BO60566 1050 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 LEFTY1O75610 366 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 CTSLP07711 333 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 KDELR1P24390 212 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 NUDT1P36639 197 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 CCR5P51681 352 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 VAV2P52735 878 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 ADPRHP54922 357 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 RHOAP61586 193 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 PAFAH1B3Q15102 231 aaKnown RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 IFI16Q16666 785 aaKnown RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 MYLK3Q32MK0 819 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 ATP13A4Q4VNC1 1196 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 ODF2Q5BJF6 829 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 ANKRD20A8PQ5CZ79 823 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 DCAF12L1Q5VU92 463 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 KIAA0895LQ68EN5 471 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 NEK5Q6P3R8 708 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 SLC23A3Q6PIS1 610 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 KIAA1328Q86T90 577 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 TMEM139Q8IV31 216 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 RYBPQ8N488 228 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 CHST14Q8NCH0 376 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 OR14C36Q8NHC7 312 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 NUSAP1Q9BXS6 441 aaKnown RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 PREBQ9HCU5 417 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 SERGEFQ9UGK8 458 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.64□□□□□ -0.55
HLA-B-254ENST00000497377 MFHAS1Q9Y4C4 1052 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 ACTL7AQ9Y615 435 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 WASF2Q9Y6W5 498 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 LAMA1P25391 3075 aa11.64□□□□□ -0.55
HLA-B-254ENST00000497377 DMXL1Q9Y485 3027 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 A0A1B0GTW7 788 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 J3KR12 359 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 KRIT1O00522 736 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 PJA2O43164 708 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 PALMO75781 387 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 SERPINF2P08697 491 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CD48P09326 243 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 COMTP21964 271 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ITGB7P26010 798 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CD27P26842 260 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 HSPA9P38646 679 aaKnown RBP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CSNK1DP48730 415 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 RENBPP51606 427 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 NEK3P51956 506 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 NSUN2Q08J23 767 aaKnown RBP eCLIP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CNTN1Q12860 1018 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CYTH1Q15438 398 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CCDC6Q16204 474 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 AASDHQ4L235 1098 aaPredicted RBP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ZNF805Q5CZA5 627 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 AGBL4Q5VU57 503 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 NCEH1Q6PIU2 408 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 LEKR1Q6ZMV7 388 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ERN2Q76MJ5 926 aaKnown RBP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ZSCAN30Q86W11 494 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 BBS5Q8N3I7 341 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 ATPAF2Q8N5M1 289 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 TPCN2Q8NHX9 752 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 PCDH19Q8TAB3 1148 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 GRIN3AQ8TCU5 1115 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 NSMCE1Q8WV22 266 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 FATE1Q969F0 183 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 RAB7BQ96AH8 199 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 BIRC7Q96CA5 298 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 RNF157Q96PX1 679 aa11.63□□□□□ -0.55
HLA-B-254ENST00000497377 CPEB1Q9BZB8 566 aaKnown RBP11.63□□□□□ -0.55
HLA-B-254ENST00000497377 C6orf106Q9H6K1 298 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms