RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 H3BNC9 293 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 H3BQF6 201 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 CLASP2O75122 1294 aaKnown RBP8.48□□□□□ -1.05
USP54-215ENST00000497106 CRCPO75575 148 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 TMEM63AO94886 807 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 IGLV3-27P01718 113 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 SLC4A1P02730 911 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 CRYMQ14894 314 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 TERF2Q15554 542 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 MTSS1LQ765P7 747 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 TAS2R42Q7RTR8 314 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 STRA8Q7Z7C7 330 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 AHI1Q8N157 1196 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 SLC44A1Q8WWI5 657 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 CCDC126Q96EE4 140 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 APOPT1Q96IL0 206 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 ELMO2Q96JJ3 720 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 MLPHQ9BV36 600 aaPredicted RBP8.48□□□□□ -1.05
USP54-215ENST00000497106 EPN3Q9H201 632 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 UBP1Q9NZI7 540 aa8.48□□□□□ -1.05
USP54-215ENST00000497106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP54-215ENST00000497106 TCRBV9S1A1TA0A576 114 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 H3BMM5 538 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 METTL18O95568 372 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 F11P03951 625 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 CLCN5P51795 746 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 POU6F1Q14863 301 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 FNBP1LQ5T0N5 605 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 RARS2Q5T160 578 aaKnown RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 OTUD1Q5VV17 481 aaPredicted RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 UNC5AQ6ZN44 842 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 TMCO2Q7Z6W1 182 aaPredicted RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 CCT6BQ92526 530 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 DCUN1D1Q96GG9 259 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 APOL2Q9BQE5 337 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 TUBB6Q9BUF5 446 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 ZFP14Q9HCL3 533 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 TMPRSS4Q9NRS4 437 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 GKN1Q9NS71 199 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 TCAF1Q9Y4C2 921 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 SCN1AP35498 2009 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 GSTA1P08263 222 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 NRIP1P48552 1158 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 CCDC153Q494R4 210 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 CYP4V2Q6ZWL3 525 aaPredicted RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 MARK2Q7KZI7 788 aaKnown RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 KDELC2Q7Z4H8 507 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 SRLQ86TD4 932 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 CRLF3Q8IUI8 442 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 ZDHHC14Q8IZN3 488 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 SH2D3CQ8N5H7 860 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 OR7D4Q8NG98 312 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 MAML1Q92585 1016 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 MYO19Q96H55 970 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 NECTIN4Q96NY8 510 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 CIPCQ9C0C6 399 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 SYTL2Q9HCH5 934 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 A0A087X1B8 175 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 BHMG1C9JSJ3 638 aaPredicted RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 NEDD8-MDP1E9PL57 170 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 C5orf67F2Z3F1 127 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 MAFKO60675 156 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 SMIM24O75264 130 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 HLA-DQB2P05538 268 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 HMGA1P17096 107 aaKnown RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 NAA20P61599 178 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 WASHC5Q12768 1159 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 SLC10A2Q12908 348 aaPredicted RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 FRG1Q14331 258 aaKnown RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 KBTBD12Q3ZCT8 623 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 PCDH20Q8N6Y1 951 aaKnown RBP8.47□□□□□ -1.05
USP54-215ENST00000497106 STYXQ8WUJ0 223 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 TIFAQ96CG3 184 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 MAGEB18Q96M61 343 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 C17orf80Q9BSJ5 609 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 PKD2L2Q9NZM6 624 aa8.47□□□□□ -1.05
USP54-215ENST00000497106 CXorf51AA0A1B0GTR3 108 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 NEMP1O14524 444 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 PAPSS2O95340 614 aaPredicted RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 STMN1P16949 149 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 ECHS1P30084 290 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 RGS4P49798 205 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 PDAP1Q13442 181 aaKnown RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 FAM83EQ2M2I3 478 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 TTLL9Q3SXZ7 439 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 RAB6CQ53S08 254 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 MANEALQ5VSG8 457 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 AGAP9Q5VTM2 703 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 KIAA0930Q6ICG6 404 aaPredicted RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 GET4Q7L5D6 327 aaPredicted RBP8.46□□□□□ -1.05
USP54-215ENST00000497106 NUDCD3Q8IVD9 361 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 BPIFB1Q8TDL5 484 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 TUBGCP5Q96RT8 1024 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 RAB6CQ9H0N0 254 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 DEC1Q9P2X7 70 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 APPL1Q9UKG1 709 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 TMCO1Q9UM00 188 aa8.46□□□□□ -1.05
USP54-215ENST00000497106 KRT4P19013 534 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms