RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SYTL3Q4VX76 610 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 CCDC70Q6NSX1 233 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 ENDOVQ8N8Q3 282 aaKnown RBP4.45□□□□□ -1.7
CLTC-208ENST00000496076 TBC1D20Q96BZ9 403 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 LTV1Q96GA3 475 aaPredicted RBP4.45□□□□□ -1.7
CLTC-208ENST00000496076 EGLN1Q9GZT9 426 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 TMEM248Q9NWD8 314 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 GRHPRQ9UBQ7 328 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 SLC39A10Q9ULF5 831 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 CNTN6Q9UQ52 1028 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 GAB2Q9UQC2 676 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 ADAM18Q9Y3Q7 739 aa4.45□□□□□ -1.7
CLTC-208ENST00000496076 A0A0U1RQJ8 604 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 PLA2G6O60733 806 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 SKAP2O75563 359 aaPredicted RBP4.44□□□□□ -1.7
CLTC-208ENST00000496076 CLDN7O95471 211 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 AGR2O95994 175 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 CFC1BP0CG36 223 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 CFC1P0CG37 223 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 PRPH2P23942 346 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 AKT1P31749 480 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 CCT5P48643 541 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 ALDH18A1P54886 795 aaKnown RBP4.44□□□□□ -1.7
CLTC-208ENST00000496076 CTTNQ14247 550 aaKnown RBP4.44□□□□□ -1.7
CLTC-208ENST00000496076 RBBP5Q15291 538 aaKnown RBP4.44□□□□□ -1.7
CLTC-208ENST00000496076 RAB30Q15771 203 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 PFKFB4Q16877 469 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 RHBDF2Q6PJF5 856 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 NRSN1Q8IZ57 195 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 DBF4BQ8NFT6 615 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 SORCS1Q8WY21 1168 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 EIF2AK1Q9BQI3 630 aaKnown RBP4.44□□□□□ -1.7
CLTC-208ENST00000496076 PAGR1Q9BTK6 254 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 HDHD5Q9BXW7 423 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 MMP28Q9H239 520 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 SLC25A13Q9UJS0 675 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 GPR52Q9Y2T5 361 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 SLC45A1Q9Y2W3 748 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 NFS1Q9Y697 457 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 MST1RQ04912 1400 aa4.44□□□□□ -1.7
CLTC-208ENST00000496076 A0A1B0GVM2 712 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.43□□□□□ -1.7
CLTC-208ENST00000496076 AQP12BA6NM10 295 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 SLC38A8A6NNN8 435 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 LGALS16A8MUM7 142 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 KDM4EB2RXH2 506 aaPredicted RBP4.43□□□□□ -1.7
CLTC-208ENST00000496076 RNMTO43148 476 aaKnown RBP4.43□□□□□ -1.7
CLTC-208ENST00000496076 FCGR2AP12318 317 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 DGKAP23743 735 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 TYK2P29597 1187 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 RFC1P35251 1148 aaPredicted RBP4.43□□□□□ -1.7
CLTC-208ENST00000496076 KRTAP10-3P60369 221 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 GALNT1Q10472 559 aaPredicted RBP4.43□□□□□ -1.7
CLTC-208ENST00000496076 TAF5Q15542 800 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 ZACNQ401N2 412 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 XKR9Q5GH70 373 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
CLTC-208ENST00000496076 SERPINA11Q86U17 422 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 PGBD5Q8N414 524 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 IL17RCQ8NAC3 791 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 NPAS1Q99742 590 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.43□□□□□ -1.7
CLTC-208ENST00000496076 SCRT2Q9NQ03 307 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 ITM2CQ9NQX7 267 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 RRN3Q9NYV6 651 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 PCDHA10Q9Y5I2 948 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 PCDHAC2Q9Y5I4 1007 aa4.43□□□□□ -1.7
CLTC-208ENST00000496076 DYTNA2CJ06 578 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 AGAP5A6NIR3 686 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 MBD3L5A6NJ08 208 aaPredicted RBP4.42□□□□□ -1.7
CLTC-208ENST00000496076 HMGB1P1B2RPK0 211 aaPredicted RBP4.42□□□□□ -1.7
CLTC-208ENST00000496076 HNRNPDLO14979 420 aaKnown RBP4.42□□□□□ -1.7
CLTC-208ENST00000496076 ZG16O60844 167 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 MMP3P08254 477 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 CLCNKBP51801 687 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 RCAN1P53805 252 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 SF3A3Q12874 501 aaKnown RBP eCLIP4.42□□□□□ -1.7
CLTC-208ENST00000496076 POSTNQ15063 836 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 TIGD6Q17RP2 521 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 WDR78Q5VTH9 848 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 MTFR2Q6P444 385 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 KIAA1324Q6UXG2 1013 aaKnown RBP4.42□□□□□ -1.7
CLTC-208ENST00000496076 GDPD4Q6W3E5 623 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 MMS22LQ6ZRQ5 1243 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 SUGP1Q8IWZ8 645 aaKnown RBP4.42□□□□□ -1.7
CLTC-208ENST00000496076 KLHDC8BQ8IXV7 354 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 IPO4Q8TEX9 1081 aaKnown RBP4.42□□□□□ -1.7
CLTC-208ENST00000496076 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 FAR1Q8WVX9 515 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 TMEM18Q96B42 140 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 RMDN3Q96TC7 470 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 ISCA1Q9BUE6 129 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 STK33Q9BYT3 514 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 LHPPQ9H008 270 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 EVA1AQ9H8M9 152 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 TM7SF3Q9NS93 570 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 DACT1Q9NYF0 836 aa4.42□□□□□ -1.7
CLTC-208ENST00000496076 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms