RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 CASKIN2Q8WXE0 1202 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 ZNF419Q96HQ0 510 aaPredicted RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 GDAP1L1Q96MZ0 367 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 RNF157Q96PX1 679 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 CINPQ9BW66 212 aaPredicted RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 MAK16Q9BXY0 300 aaKnown RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 TMEM74BQ9NUR3 256 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 DDX56Q9NY93 547 aaKnown RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 LHX3Q9UBR4 397 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 EIF2B4Q9UI10 523 aaKnown RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 PCDHGA5Q9Y5G8 931 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 HEY1Q9Y5J3 304 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
CALD1-223ENST00000496024 WASF2Q9Y6W5 498 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 LAMA1P25391 3075 aa9.98□□□□□ -0.81
CALD1-223ENST00000496024 ANKRD36A6QL64 1941 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 TRPM6Q9BX84 2022 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 CXorf51AA0A1B0GTR3 108 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 TTC24A2A3L6 582 aaPredicted RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 GRID2IPA4D2P6 1211 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 C3orf70A6NLC5 250 aaPredicted RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 METTL12A8MUP2 240 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 APOL1O14791 398 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 PSTPIP1O43586 416 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 MAFKO60675 156 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 GSRP00390 522 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 C7P10643 843 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 KRT10P13645 584 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 TGM1P22735 817 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 MAT2AP31153 395 aaKnown RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 RGRP47804 291 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 ADPRHP54922 357 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 RAD51Q06609 339 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 SLC10A7Q0GE19 358 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 SLC10A2Q12908 348 aaPredicted RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 ZNF235Q14590 738 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 LBRQ14739 615 aaKnown RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 PAFAH1B3Q15102 231 aaKnown RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 WDR45BQ5MNZ6 344 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 C11orf63Q6NUN7 778 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 NPNTQ6UXI9 565 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 SYT12Q8IV01 421 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 CCDC50Q8IVM0 306 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 LRRC8AQ8IWT6 810 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 TXLNBQ8N3L3 684 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 ZCCHC9Q8N567 271 aaKnown RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.81
CALD1-223ENST00000496024 PAF1Q8N7H5 531 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 C12orf50Q8NA57 414 aaPredicted RBP9.97□□□□□ -0.81
CALD1-223ENST00000496024 CCNYQ8ND76 341 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 CCDC112Q8NEF3 446 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 CADM4Q8NFZ8 388 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 OR2T34Q8NGX1 318 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 KIAA1524Q8TCG1 905 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 NSMCE1Q8WV22 266 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 KRT35Q92764 455 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 FAF2Q96CS3 445 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 KLHL32Q96NJ5 620 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 FSCN3Q9NQT6 498 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 VPS45Q9NRW7 570 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 PILRBQ9UKJ0 227 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 FZD4Q9ULV1 537 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 ADGRG1Q9Y653 693 aa9.97□□□□□ -0.81
CALD1-223ENST00000496024 CACNA1EQ15878 2313 aa9.96□□□□□ -0.81
CALD1-223ENST00000496024 C16orf96A6NNT2 1141 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 BTNL10A8MVZ5 291 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 MUSKO15146 869 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 ARHGAP6O43182 974 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 NRDCO43847 1150 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 GDF9O60383 454 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 LRP3O75074 770 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 GJB3O75712 270 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PIGNO95427 931 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 ZNF806P0C7X5 589 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 SCNN1BP51168 640 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PPP2CBP62714 309 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PPP2CAP67775 309 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 IRX4P78413 519 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 CCZ1BP86790 482 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
CALD1-223ENST00000496024 GALNT2Q10471 571 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 CSRP2Q16527 193 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 AASDHQ4L235 1098 aaPredicted RBP9.96□□□□□ -0.82
CALD1-223ENST00000496024 TRIM61Q5EBN2 209 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 LRRC73Q5JTD7 316 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 FAM182AQ5T1J6 154 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PIP5KL1Q5T9C9 394 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 TMCO4Q5TGY1 634 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 AGBL4Q5VU57 503 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 KIAA0895LQ68EN5 471 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 FBXL19Q6PCT2 694 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 GDPD4Q6W3E5 623 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 SPOCD1Q6ZMY3 1216 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PRR23CQ6ZRP0 262 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 B4GALNT4Q76KP1 1039 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 ERN2Q76MJ5 926 aaKnown RBP9.96□□□□□ -0.82
CALD1-223ENST00000496024 PARS2Q7L3T8 475 aaKnown RBP9.96□□□□□ -0.82
CALD1-223ENST00000496024 SRLQ86TD4 932 aa9.96□□□□□ -0.82
CALD1-223ENST00000496024 PLPP6Q8IY26 295 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms