RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SBK3P0C264 359 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 KRT10P13645 584 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CEACAM1P13688 526 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CEBPBP17676 345 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 MPLP40238 635 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CXCL12P48061 93 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CTXN1P60606 82 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 MXD4Q14582 209 aaPredicted RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 PSMD5Q16401 504 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 FAM187BQ17R55 369 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 USP41Q3LFD5 358 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 XKR9Q5GH70 373 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 TANGO2Q6ICL3 276 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 RETSATQ6NUM9 610 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 FAM180BQ6P0A1 224 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 FAM180AQ6UWF9 173 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 CD300LDQ6UXZ3 194 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ZNF852Q6ZMS4 543 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 GRASPQ7Z6J2 395 aaPredicted RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 LONP2Q86WA8 852 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 PALB2Q86YC2 1186 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 LNX1Q8TBB1 728 aaPredicted RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 IPO4Q8TEX9 1081 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 STYXQ8WUJ0 223 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 STON2Q8WXE9 905 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ASB12Q8WXK4 309 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 USP13Q92995 863 aaPredicted RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 GTF3C6Q969F1 213 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 MUL1Q969V5 352 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 IQCDQ96DY2 449 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 PPP1R10Q96QC0 940 aaKnown RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 KIFC3Q9BVG8 833 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 UBN1Q9NPG3 1134 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 HCFC1R1Q9NWW0 138 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.57□□□□□ -1.68
VPS52-222ENST00000495981 LRFN1Q9P244 771 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 SAE1Q9UBE0 346 aaPredicted RBP4.57□□□□□ -1.68
VPS52-222ENST00000495981 MTRRQ9UBK8 725 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 SSX2IPQ9Y2D8 614 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 ACTL7AQ9Y615 435 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 C2CD3Q4AC94 2353 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 FLNCQ14315 2725 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 POLQO75417 2590 aa4.57□□□□□ -1.68
VPS52-222ENST00000495981 DOPEY2Q9Y3R5 2298 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 PHLPP2Q6ZVD8 1323 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 A0A0G2JNJ9 132 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 LRRIQ4A6NIV6 560 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 TMEM233B4DJY2 109 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 BTN3A1O00481 513 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CPLX1O14810 134 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CCL16O15467 120 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 ASAP2O43150 1006 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 JAK2O60674 1132 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 MED24O75448 989 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CDKL5O76039 1030 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 FSBPO95073 299 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 NDST3O95803 873 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 KNG1P01042 644 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CD1AP06126 327 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 RNASE1P07998 156 aaKnown RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 CAPN3P20807 821 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CSRP1P21291 193 aaKnown RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 PSMA5P28066 241 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 GABRB3P28472 473 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 TKTP29401 623 aaKnown RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 KRT2P35908 639 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CCR2P41597 374 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 MC3RP41968 323 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CCR3P51677 355 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 ITGA1P56199 1179 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 SIM1P81133 766 aaPredicted RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 ROR1Q01973 937 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 TFDP1Q14186 410 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 PTK2BQ14289 1009 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 GLRA4Q5JXX5 417 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 PRSS36Q5K4E3 855 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 ADGRF1Q5T601 910 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 LIN9Q5TKA1 542 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 FAM171A1Q5VUB5 890 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 SLC8B1Q6J4K2 584 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 C16orf54Q6UWD8 224 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 UNC13DQ70J99 1090 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 MTSS1LQ765P7 747 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CLEC14AQ86T13 490 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 TBC1D1Q86TI0 1168 aaPredicted RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 WDR5BQ86VZ2 330 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 ADGRG2Q8IZP9 1017 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 DAW1Q8N136 415 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 GALNT15Q8N3T1 639 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 GLIS1Q8NBF1 620 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 NSUN7Q8NE18 718 aaKnown RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 OR1N1Q8NGS0 311 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 OR56A3Q8NH54 315 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 FAM71BQ8TC56 605 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 PIGOQ8TEQ8 1089 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 CASKIN2Q8WXE0 1202 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 ING5Q8WYH8 240 aa4.56□□□□□ -1.68
VPS52-222ENST00000495981 LIN37Q96GY3 246 aaPredicted RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 INTS4Q96HW7 963 aaKnown RBP4.56□□□□□ -1.68
VPS52-222ENST00000495981 TMEM209Q96SK2 561 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms