RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ARMCX6Q7L4S7 300 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 LRRC49Q8IUZ0 686 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 FANCMQ8IYD8 2048 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 PGBD5Q8N414 524 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 GPR174Q9BXC1 333 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 OSBPL8Q9BZF1 889 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 SCML1Q9UN30 329 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 NCKAP1Q9Y2A7 1128 aa19.72■□□□□ 0.75
HDAC4-212ENST00000495497 PROB1E7EW31 1015 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 NDUFS2O75306 463 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 POP4O95707 220 aaKnown RBP19.71■□□□□ 0.75
HDAC4-212ENST00000495497 LMNAP02545 664 aaKnown RBP19.71■□□□□ 0.75
HDAC4-212ENST00000495497 MX2P20592 715 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 CCNCP24863 283 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 OXTRP30559 389 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 ZNF235Q14590 738 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 PMS2CLQ68D20 193 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 BBS12Q6ZW61 710 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 USP30Q70CQ3 517 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 ASCL5Q7RTU5 278 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 SRLQ86TD4 932 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 NSMCE1Q8WV22 266 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 ZNF419Q96HQ0 510 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-212ENST00000495497 ZC3H10Q96K80 434 aaKnown RBP19.71■□□□□ 0.75
HDAC4-212ENST00000495497 NSMCE3Q96MG7 304 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 OLFM3Q96PB7 478 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 ALS2CR12Q96Q35 445 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 SEPT3Q9UH03 358 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 RAB23Q9ULC3 237 aa19.71■□□□□ 0.75
HDAC4-212ENST00000495497 USP27XA6NNY8 438 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 MATN3O15232 486 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 ZSCAN12O43309 604 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 PIGNO95427 931 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 UGT2B4P06133 528 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 TGM2P21980 687 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 PTGER3P43115 390 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 MMP13P45452 471 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 DHPSP49366 369 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-212ENST00000495497 MAXP61244 160 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 AP1B1Q10567 949 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 ELF2Q15723 593 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 MARC1Q5VT66 337 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 SLC36A4Q6YBV0 504 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 LPCAT2Q7L5N7 544 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 CCDC13Q8IYE1 715 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 HDAC11Q96DB2 347 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 TSGA13Q96PP4 275 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 PSKH2Q96QS6 385 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 BTBD1Q9H0C5 482 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 SEMA4AQ9H3S1 761 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 C6orf106Q9H6K1 298 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-212ENST00000495497 NT5MQ9NPB1 228 aa19.7■□□□□ 0.74
HDAC4-212ENST00000495497 FAM47DPA6NHR8 397 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 KCNK1O00180 336 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 RHOBTB1O94844 696 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 PTPN7P35236 360 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 NR2C2P49116 596 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 SCNN1BP51168 640 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 PPIDQ08752 370 aaKnown RBP19.69■□□□□ 0.74
HDAC4-212ENST00000495497 PDK1Q15118 436 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 RPS6KA1Q15418 735 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 TIGD7Q6NT04 549 aaPredicted RBP19.69■□□□□ 0.74
HDAC4-212ENST00000495497 GDPD4Q6W3E5 623 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 C11orf74Q86VG3 221 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 SLC41A1Q8IVJ1 513 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.69■□□□□ 0.74
HDAC4-212ENST00000495497 TEX26Q8N6G2 289 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 TRIM58Q8NG06 486 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 OR14C36Q8NHC7 312 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 MAML1Q92585 1016 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 P3H4Q92791 437 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 KLHL32Q96NJ5 620 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 FAM118BQ9BPY3 351 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 SGK2Q9HBY8 427 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 RBM22Q9NW64 420 aaKnown RBP eCLIP19.69■□□□□ 0.749e-6■□□□□ 9.6
HDAC4-212ENST00000495497 SEPT10Q9P0V9 454 aa19.69■□□□□ 0.74
HDAC4-212ENST00000495497 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.69■□□□□ 0.74
HDAC4-212ENST00000495497 PRR23AA6NEV1 266 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 SEMA4FO95754 770 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 JCHAINP01591 159 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 CCNB1P14635 433 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 CETN2P41208 172 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 CSNK1DP48730 415 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 RENBPP51606 427 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 RAD51Q06609 339 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 NSUN2Q08J23 767 aaKnown RBP eCLIP19.68■□□□□ 0.74
HDAC4-212ENST00000495497 SFSWAPQ12872 951 aaKnown RBP19.68■□□□□ 0.74
HDAC4-212ENST00000495497 ZBTB17Q13105 803 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 HNRNPDQ14103 355 aaKnown RBP19.68■□□□□ 0.74
HDAC4-212ENST00000495497 PIP5KL1Q5T9C9 394 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 CCDC181Q5TID7 509 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 AGBL4Q5VU57 503 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 PARS2Q7L3T8 475 aaKnown RBP19.68■□□□□ 0.74
HDAC4-212ENST00000495497 ZC3H18Q86VM9 953 aaKnown RBP19.68■□□□□ 0.74
HDAC4-212ENST00000495497 CAMK1DQ8IU85 385 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 CEP41Q9BYV8 373 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 C10orf88Q9H8K7 445 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 DYRK4Q9NR20 520 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 FZD4Q9ULV1 537 aa19.68■□□□□ 0.74
HDAC4-212ENST00000495497 EFR3BQ9Y2G0 817 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms