RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 HEMGNQ9BXL5 484 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 OSBPL1AQ9BXW6 950 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 DUSP15Q9H1R2 295 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 CD93Q9NPY3 652 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 WSB2Q9NYS7 404 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 DTLQ9NZJ0 730 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 NCDNQ9UBB6 729 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 EVLQ9UI08 416 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 MBD1Q9UIS9 605 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 SARDHQ9UL12 918 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 FZD4Q9ULV1 537 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 PACSIN2Q9UNF0 486 aaPredicted RBP12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 FRYLO94915 3013 aa12.27□□□□□ -0.45
CSNK1E-213ENST00000495232 hCG_1818297A0A087WSY0 165 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 GOLGA6L9A6NEM1 432 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 FAM47DPA6NHR8 397 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 LRRC72A6NJI9 287 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 TJP3O95049 919 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 SEMA4FO95754 770 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 CTSLP07711 333 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 C7P10643 843 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 MMP13P45452 471 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 PEX5P50542 639 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 SCNN1BP51168 640 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 ITKQ08881 620 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 NSUN2Q08J23 767 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 SLC10A7Q0GE19 358 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 AP1B1Q10567 949 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 SLC10A2Q12908 348 aaPredicted RBP12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 HNRNPDQ14103 355 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 TAZQ16635 292 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 PMS2CLQ68D20 193 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 NPNTQ6UXI9 565 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 CCDC13Q8IYE1 715 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 DEFB119Q8N690 84 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 TSEN2Q8NCE0 465 aaKnown RBP12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 OR14C36Q8NHC7 312 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 HDAC11Q96DB2 347 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 LOXL4Q96JB6 756 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 TSGA13Q96PP4 275 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 PSKH2Q96QS6 385 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 PHOX2BQ99453 314 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 OSBPL8Q9BZF1 889 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 BRD8Q9H0E9 1235 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 NEUROG2Q9H2A3 272 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 KCNF1Q9H3M0 494 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 LHX3Q9UBR4 397 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 PLXND1Q9Y4D7 1925 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 THADAQ6YHU6 1953 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
CSNK1E-213ENST00000495232 MEI4A8MW99 385 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 MATN3O15232 486 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 SLC7A4O43246 635 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 UGT2B4P06133 528 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 PYGMP11217 842 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 CCNB1P14635 433 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ITGB7P26010 798 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 GKP32189 559 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ACSL1P33121 698 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 MAPK8P45983 427 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 CSNK1DP48730 415 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ZNF33AQ06730 810 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 CNTN1Q12860 1018 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 RPS6KA1Q15418 735 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ZNF805Q5CZA5 627 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 LYSMD4Q5XG99 296 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 FBXL19Q6PCT2 694 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 GDPD4Q6W3E5 623 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ARMCX6Q7L4S7 300 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 SRLQ86TD4 932 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 RGL4Q8IZJ4 473 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 SUMF1Q8NBK3 374 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 CADM4Q8NFZ8 388 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ALG3Q92685 438 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 FATE1Q969F0 183 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 HES6Q96HZ4 224 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 LGMNQ99538 433 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 FERMT1Q9BQL6 677 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 ATP13A3Q9H7F0 1226 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 NT5MQ9NPB1 228 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 SERGEFQ9UGK8 458 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 EFR3BQ9Y2G0 817 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 TTLL3Q9Y4R7 772 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 WASF2Q9Y6W5 498 aa12.25□□□□□ -0.45
CSNK1E-213ENST00000495232 TBC1D3DA0A087WVF3 549 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 TBC1D3IA0A087WXS9 549 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 TBC1D3EA0A087X179 549 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 TBC1D3KA0A087X1G2 549 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 TBC1D3FA6NER0 549 aaPredicted RBP12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 PRR23AA6NEV1 266 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 TBC1D3LB9A6J9 549 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 APOC4-APOC2K7ER74 178 aa12.24□□□□□ -0.45
CSNK1E-213ENST00000495232 DDX3YO15523 660 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms