RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	CD160	O95971	181 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	CR2	P20023	1033 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	PSMB4	P28070	264 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	CTSO	P43234	321 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	VPS41	P49754	854 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	STK19	P49842	368 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	STARD6	P59095	220 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	ENPP2	Q13822	863 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	ELAVL3	Q14576	367 aa	Known RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	ZNF234	Q14588	700 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	FSTL4	Q6MZW2	842 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	TXNDC11	Q6PKC3	985 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	B4GALNT4	Q76KP1	1039 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	KLHDC8B	Q8IXV7	354 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	CHPF	Q8IZ52	775 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	GPR161	Q8N6U8	529 aa	Known RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	TSEN2	Q8NCE0	465 aa	Known RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	CYB5D2	Q8WUJ1	264 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	TRIM51	Q9BSJ1	452 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	FSD1L	Q9BXM9	530 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	CEP41	Q9BYV8	373 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	OSBPL6	Q9BZF3	934 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	ATP13A3	Q9H7F0	1226 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	MTRF1L	Q9UGC7	380 aa	Known RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	MUC22	E2RYF6	1773 aa	Predicted RBP	13.73	□□□□□ -0.21
APTX-231	ENST00000494973	WASH3P	C4AMC7	463 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973		K7EQS6	105 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	SYNCRIP	O60506	623 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	RNASEH1	O60930	286 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	ATG13	O75143	517 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	SEC31A	O94979	1220 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	AP2A1	O95782	977 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	MT-CO1	P00395	513 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	EPO	P01588	193 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	PRNP	P04156	253 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	RHOXF2B	P0C7M4	288 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	ZSCAN5DP	P0CG00	497 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	SERPINA4	P29622	427 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	NTSR1	P30989	418 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	MAGEA9	P43362	315 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	KIR2DL1	P43626	348 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	SCNN1B	P51168	640 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	RPL26	P61254	145 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	GUCY2D	Q02846	1103 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	TRIP13	Q15645	432 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	EOGT	Q5NDL2	527 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	IZUMO3	Q5VZ72	239 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	ARMC3	Q5W041	872 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	LEKR1	Q6ZMV7	388 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	SRL	Q86TD4	932 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	NDUFAF2	Q8N183	169 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	RYBP	Q8N488	228 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	FRS2	Q8WU20	508 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	LRRN4	Q8WUT4	740 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	OR8D1	Q8WZ84	308 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	ZNF641	Q96N77	438 aa	Predicted RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	SRPK1	Q96SB4	655 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	RHOXF2	Q9BQY4	288 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	CPEB1	Q9BZB8	566 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	TM6SF2	Q9BZW4	377 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	PHACTR1	Q9C0D0	580 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	TMEM245	Q9H330	911 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	ETNK1	Q9HBU6	452 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	XAB2	Q9HCS7	855 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	CA14	Q9ULX7	337 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	RPL26L1	Q9UNX3	145 aa	Known RBP	13.72	□□□□□ -0.21
APTX-231	ENST00000494973	STON1	Q9Y6Q2	735 aa		13.72	□□□□□ -0.21
APTX-231	ENST00000494973	MYO18A	Q92614	2054 aa	Known RBP	13.71	□□□□□ -0.21
APTX-231	ENST00000494973	KANSL1L	A0AUZ9	987 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	C1QTNF3-AMACR	E9PGA6	284 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973		K7ERQ8	282 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	METTL18	O95568	372 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	EGF	P01133	1207 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	APRT	P07741	180 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	ETS1	P14921	441 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	TNFRSF8	P28908	595 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	CD68	P34810	354 aa	Predicted RBP	13.71	□□□□□ -0.21
APTX-231	ENST00000494973	CD86	P42081	329 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	CCNH	P51946	323 aa	Predicted RBP	13.71	□□□□□ -0.21
APTX-231	ENST00000494973	MAX	P61244	160 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	BCL2L1	Q07817	233 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	CCDC15	Q0P6D6	951 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	SFSWAP	Q12872	951 aa	Known RBP	13.71	□□□□□ -0.21
APTX-231	ENST00000494973	CCIN	Q13939	588 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	MYLK3	Q32MK0	819 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	CFAP58	Q5T655	872 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.71	□□□□□ -0.21
APTX-231	ENST00000494973	FAM46C	Q5VWP2	391 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	EGFLAM	Q63HQ2	1017 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	NCEH1	Q6PIU2	408 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973		Q6ZVU0	165 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	PGBD5	Q8N414	524 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	PAF1	Q8N7H5	531 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	GLIS1	Q8NBF1	620 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	MCU	Q8NE86	351 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	MYRIP	Q8NFW9	859 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	ARRDC2	Q8TBH0	407 aa		13.71	□□□□□ -0.21
APTX-231	ENST00000494973	HCAR2	Q8TDS4	363 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms