RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RAD51BO15315 384 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 SPINT1O43278 529 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 PCDHGA12O60330 932 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 UGT2B4P06133 528 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 MIPP30301 263 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 NEK3P51956 506 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 TPI1P60174 286 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 SLC20A2Q08357 652 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 DNAJC3Q13217 504 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 TXNRD3NBQ6F5E7 133 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 ARHGAP36Q6ZRI8 547 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 HORMAD1Q86X24 394 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 TMEM145Q8NBT3 493 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 VCPIP1Q96JH7 1222 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 KLHL32Q96NJ5 620 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 EPAS1Q99814 870 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.79□□□□□ -0.68
NELFE-213ENST00000494956 HDAC8Q9BY41 377 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 SLC39A8Q9C0K1 460 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 PREBQ9HCU5 417 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 LHX3Q9UBR4 397 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 HPCAL4Q9UM19 191 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 FADS3Q9Y5Q0 445 aa10.79□□□□□ -0.68
NELFE-213ENST00000494956 ARID1BQ8NFD5 2236 aaPredicted RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 SHROOM3Q8TF72 1996 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 A0A087X0T9 212 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 C16orf96A6NNT2 1141 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 WASH4PA8MWX3 477 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 EEF2KO00418 725 aaKnown RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 LRCH4O75427 683 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 PIGNO95427 931 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 PAK4O96013 591 aaPredicted RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 GYPCP04921 128 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ITGAVP06756 1048 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 FAM228BP0C875 321 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 THEGLP0DJG4 465 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 GZMAP12544 262 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ITGB7P26010 798 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 IL1R2P27930 398 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 EPHA8P29322 1005 aaPredicted RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 ETFBP38117 255 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 SEMG2Q02383 582 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 SERINC3Q13530 473 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 HNRNPDQ14103 355 aaKnown RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 STAT4Q14765 748 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 SUZ12Q15022 739 aaKnown RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 CYTH1Q15438 398 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 SMTNL2Q2TAL5 461 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 MYLK3Q32MK0 819 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 TMEM259Q4ZIN3 620 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 SETMARQ53H47 684 aaPredicted RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 SLC45A4Q5BKX6 768 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ZNF542PQ5EBM4 170 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 PPP6R3Q5H9R7 873 aaPredicted RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 FIGNQ5HY92 759 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ERMARDQ5T6L9 678 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 FBXL19Q6PCT2 694 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 GCNT7Q6ZNI0 430 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 GLRX5Q86SX6 157 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 CPNE8Q86YQ8 564 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 EID2Q8N6I1 236 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 NPWQ8N729 165 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 MFSD2AQ8NA29 543 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 OR13H1Q8NG92 308 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 OR2AP1Q8NGE2 309 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 SAP25Q8TEE9 199 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ADAMTS14Q8WXS8 1223 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ISG20Q96AZ6 181 aaKnown RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 PPP1R16AQ96I34 528 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 XPO4Q9C0E2 1151 aaKnown RBP10.78□□□□□ -0.68
NELFE-213ENST00000494956 THAP2Q9H0W7 228 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 ISCUQ9H1K1 167 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 LRRC19Q9H756 370 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 CATSPERBQ9H7T0 1116 aa10.78□□□□□ -0.68
NELFE-213ENST00000494956 FAM149AA5PLN7 773 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 POM121BA6NF01 834 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 IGLON5A6NGN9 336 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 PRAMEF26H0Y7S4 382 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 GOLGA6L19H0YKK7 550 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 GSRP00390 522 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 PROS1P07225 676 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 ERCC2P18074 760 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 CASP14P31944 242 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 GRK6P43250 576 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 RGRP47804 291 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 PAPOLAP51003 745 aaKnown RBP10.77□□□□□ -0.69
NELFE-213ENST00000494956 YBEYP58557 167 aaPredicted RBP10.77□□□□□ -0.69
NELFE-213ENST00000494956 RHOAP61586 193 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 SNRPD1P62314 119 aaKnown RBP10.77□□□□□ -0.69
NELFE-213ENST00000494956 TPM4P67936 248 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 NFKBIBQ15653 356 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 ZNF805Q5CZA5 627 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 TPRG1LQ5T0D9 272 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 RFX8Q6ZV50 586 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 ARHGAP12Q8IWW6 846 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 SLC22A18ASQ8N1D0 253 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 UMODL1-AS1Q8N2C9 162 aa10.77□□□□□ -0.69
NELFE-213ENST00000494956 SKA1Q96BD8 255 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms