RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 UBL7Q96S82 380 aaPredicted RBP23.64■■□□□ 1.37
COL27A1-208ENST00000494780 C1QTNF2Q9BXJ5 285 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 TM6SF2Q9BZW4 377 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 RAB6CQ9H0N0 254 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 MAGEH1Q9H213 219 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 NDFIP2Q9NV92 336 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 TMEM248Q9NWD8 314 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 TAB2Q9NYJ8 693 aa23.64■■□□□ 1.37
COL27A1-208ENST00000494780 ASXL3Q9C0F0 2248 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 SPTY2D1-AS1A0A0U1RR47 76 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 RAD51BO15315 384 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 OPA1O60313 960 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 GSRP00390 522 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 CSF2P04141 144 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 PTPN9P43378 593 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 FMO1Q01740 532 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 SGCGQ13326 291 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 POLD3Q15054 466 aaPredicted RBP23.63■■□□□ 1.37
COL27A1-208ENST00000494780 ZNF542PQ5EBM4 170 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 CDCP2Q5VXM1 449 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 TRIM72Q6ZMU5 477 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 PARGQ86W56 976 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 PRORYQ9H606 182 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 CAAP1Q9H8G2 361 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 DNAI1Q9UI46 699 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 HPCAL4Q9UM19 191 aa23.63■■□□□ 1.37
COL27A1-208ENST00000494780 TDRD6O60522 2096 aaKnown RBP23.63■■□□□ 1.37
COL27A1-208ENST00000494780 C2CD4BA6NLJ0 364 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 C16orf96A6NNT2 1141 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 H3BM21 787 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 K7ESM1 405 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 FPGTO14772 594 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 NME1P15531 152 aaKnown RBP23.62■■□□□ 1.37
COL27A1-208ENST00000494780 CHRNB2P17787 502 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 SNRPD1P62314 119 aaKnown RBP23.62■■□□□ 1.37
COL27A1-208ENST00000494780 TBC1D25Q3MII6 688 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 ZNF805Q5CZA5 627 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 RYBPQ8N488 228 aaPredicted RBP23.62■■□□□ 1.37
COL27A1-208ENST00000494780 OR2AP1Q8NGE2 309 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 JOSD2Q8TAC2 188 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 CENPIQ92674 756 aaPredicted RBP23.62■■□□□ 1.37
COL27A1-208ENST00000494780 TBC1D31Q96DN5 1066 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 KLF6Q99612 283 aaPredicted RBP23.62■■□□□ 1.37
COL27A1-208ENST00000494780 C11orf70Q9BRQ4 267 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 IPO11Q9UI26 975 aaKnown RBP23.62■■□□□ 1.37
COL27A1-208ENST00000494780 DAAM1Q9Y4D1 1078 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 CSNK1G3Q9Y6M4 447 aa23.62■■□□□ 1.37
COL27A1-208ENST00000494780 LY6G6EA0A0G2JKS1 128 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 IGLON5A6NGN9 336 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 FAM72CH0Y354 149 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 LRIG2O94898 1065 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 SOX5P35711 763 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 ABL2P42684 1182 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 JAM2P57087 298 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 POLR2FP61218 127 aaKnown RBP23.61■■□□□ 1.37
COL27A1-208ENST00000494780 FAM72AQ5TYM5 149 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 FAM72DQ6L9T8 149 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 PHLDB2Q86SQ0 1253 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 FAM72BQ86X60 149 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 DENND6BQ8NEG7 585 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 ZNF548Q8NEK5 533 aaPredicted RBP23.61■■□□□ 1.37
COL27A1-208ENST00000494780 OR6K2Q8NGY2 324 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 SLC30A5Q8TAD4 765 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 ENOX1Q8TC92 643 aaKnown RBP23.61■■□□□ 1.37
COL27A1-208ENST00000494780 GPT2Q8TD30 523 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 ARHGEF26Q96DR7 871 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 DEPDC7Q96QD5 511 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 OSBPL1AQ9BXW6 950 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 VPS16Q9H269 839 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 NEU3Q9UQ49 428 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 U3KQA8 63 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 CHD5Q8TDI0 1954 aa23.61■■□□□ 1.37
COL27A1-208ENST00000494780 KRIT1O00522 736 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 NEMP1O14524 444 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 RIOK3O14730 519 aaKnown RBP23.6■■□□□ 1.37
COL27A1-208ENST00000494780 RAMP2O60895 175 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 POP4O95707 220 aaKnown RBP23.6■■□□□ 1.37
COL27A1-208ENST00000494780 TPM2P07951 284 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 PLEKP08567 350 aaPredicted RBP23.6■■□□□ 1.37
COL27A1-208ENST00000494780 GKP32189 559 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 KLK7P49862 253 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 PDE1CQ14123 709 aaPredicted RBP23.6■■□□□ 1.37
COL27A1-208ENST00000494780 FKBP15Q5T1M5 1219 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 ZCCHC8Q6NZY4 707 aaKnown RBP23.6■■□□□ 1.37
COL27A1-208ENST00000494780 NTAN1Q96AB6 310 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 FAM207AQ9NSI2 230 aaPredicted RBP23.6■■□□□ 1.37
COL27A1-208ENST00000494780 PCDHB1Q9Y5F3 818 aa23.6■■□□□ 1.37
COL27A1-208ENST00000494780 ZSCAN5CA6NGD5 496 aaPredicted RBP23.59■■□□□ 1.37
COL27A1-208ENST00000494780 NEBLO76041 1014 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 KRT3P12035 628 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 MYF5P13349 255 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 HDAC4P56524 1084 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 GSCP56915 257 aaPredicted RBP23.59■■□□□ 1.37
COL27A1-208ENST00000494780 PTP4A2Q12974 167 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 KRT31Q15323 416 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 MYLK3Q32MK0 819 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 CDKAL1Q5VV42 579 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 CCDC185Q8N715 623 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 FAM172AQ8WUF8 416 aa23.59■■□□□ 1.37
COL27A1-208ENST00000494780 VOPP1Q96AW1 172 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms