RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 KNL1Q8NG31 2342 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 A0A087X0T9 212 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 FAM228BP0C875 321 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 ADRB3P13945 408 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 PRLRP16471 622 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 MYLK3Q32MK0 819 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 CYP4V2Q6ZWL3 525 aaPredicted RBP33.75■■■□□ 2.99
CBX4-203ENST00000494546 MFSD2AQ8NA29 543 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 CASKIN2Q8WXE0 1202 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 ELF4Q99607 663 aaPredicted RBP33.75■■■□□ 2.99
CBX4-203ENST00000494546 MYOCQ99972 504 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 NCAPGQ9BPX3 1015 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 BTBD3Q9Y2F9 522 aa33.75■■■□□ 2.99
CBX4-203ENST00000494546 A0A1B0GTQ1 180 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 PRAMEF26H0Y7S4 382 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 POP4O95707 220 aaKnown RBP33.74■■■□□ 2.99
CBX4-203ENST00000494546 NXPH1P58417 271 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 RFX8Q6ZV50 586 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 PARS2Q7L3T8 475 aaKnown RBP33.74■■■□□ 2.99
CBX4-203ENST00000494546 LRIG1Q96JA1 1093 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 GDAP1L1Q96MZ0 367 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 WASF3Q9UPY6 502 aa33.74■■■□□ 2.99
CBX4-203ENST00000494546 PCDHGA12O60330 932 aa33.73■■■□□ 2.99
CBX4-203ENST00000494546 NDST2P52849 883 aa33.73■■■□□ 2.99
CBX4-203ENST00000494546 RHOAP61586 193 aa33.73■■■□□ 2.99
CBX4-203ENST00000494546 ZNF284Q2VY69 593 aa33.73■■■□□ 2.99
CBX4-203ENST00000494546 INO80DQ53TQ3 878 aaPredicted RBP33.73■■■□□ 2.99
CBX4-203ENST00000494546 SEL1L3Q68CR1 1132 aa33.73■■■□□ 2.99
CBX4-203ENST00000494546 PSTKQ8IV42 348 aaKnown RBP33.73■■■□□ 2.99
CBX4-203ENST00000494546 LRRC19Q9H756 370 aa33.73■■■□□ 2.99
CBX4-203ENST00000494546 CBFA2T2O43439 604 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 HYAL3O43820 417 aaPredicted RBP33.72■■■□□ 2.99
CBX4-203ENST00000494546 UGT2B4P06133 528 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 PCK1P35558 622 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 ACAP1Q15027 740 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 ZNF805Q5CZA5 627 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 CCDC122Q5T0U0 273 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 ALKBH5Q6P6C2 394 aaKnown RBP33.72■■■□□ 2.99
CBX4-203ENST00000494546 SCNM1Q9BWG6 230 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 SLC39A8Q9C0K1 460 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 FZD3Q9NPG1 666 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 UBA2Q9UBT2 640 aaPredicted RBP33.72■■■□□ 2.99
CBX4-203ENST00000494546 ZFR2Q9UPR6 939 aaKnown RBP33.72■■■□□ 2.99
CBX4-203ENST00000494546 FADS3Q9Y5Q0 445 aa33.72■■■□□ 2.99
CBX4-203ENST00000494546 C16orf96A6NNT2 1141 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 MAGEC1O60732 1142 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 IGSF6O95976 241 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 FTH1P19P0C7X4 201 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 ERCC2P18074 760 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 GRK6P43250 576 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 RNF214Q8ND24 703 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 BTBD6Q96KE9 485 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 KLHL32Q96NJ5 620 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 NUP85Q9BW27 656 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 OSBPL1AQ9BXW6 950 aa33.71■■■□□ 2.99
CBX4-203ENST00000494546 ARHGAP42A6NI28 874 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 J3KR12 359 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 TRIM16O95361 564 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 TCF4P15884 667 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 IL1R2P27930 398 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 AKT2P31751 481 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 PAPOLAP51003 745 aaKnown RBP33.7■■■□□ 2.99
CBX4-203ENST00000494546 RAD51Q06609 339 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 OVGP1Q12889 678 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 MAPK8IP2Q13387 824 aaPredicted RBP33.7■■■□□ 2.99
CBX4-203ENST00000494546 PIGHQ14442 188 aaPredicted RBP33.7■■■□□ 2.99
CBX4-203ENST00000494546 SMTNL2Q2TAL5 461 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 IQCHQ86VS3 1027 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 SPATS2Q86XZ4 545 aaKnown RBP33.7■■■□□ 2.99
CBX4-203ENST00000494546 GATAD2AQ86YP4 633 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 TMEM145Q8NBT3 493 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 BAHD1Q8TBE0 780 aaPredicted RBP33.7■■■□□ 2.99
CBX4-203ENST00000494546 FEM1CQ96JP0 617 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 CDC6Q99741 560 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 ZWILCHQ9H900 591 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 CWC15Q9P013 229 aaKnown RBP33.7■■■□□ 2.99
CBX4-203ENST00000494546 ANAPC7Q9UJX3 599 aa33.7■■■□□ 2.99
CBX4-203ENST00000494546 TP53BP1Q12888 1972 aaPredicted RBP33.69■■■□□ 2.98
CBX4-203ENST00000494546 CYP1A2P05177 515 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 ARRB1P49407 418 aaPredicted RBP33.69■■■□□ 2.98
CBX4-203ENST00000494546 CYTH1Q15438 398 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 SHBQ15464 509 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 TMEM259Q4ZIN3 620 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 SPECC1LQ69YQ0 1117 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 GDPD4Q6W3E5 623 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 GLRX5Q86SX6 157 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 PNPLA1Q8N8W4 532 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 HSPH1Q92598 858 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 VOPP1Q96AW1 172 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 ARHGEF26Q96DR7 871 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 KLHDC7BQ96G42 594 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 EXOC2Q96KP1 924 aa33.69■■■□□ 2.98
CBX4-203ENST00000494546 DOCK9Q9BZ29 2069 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 AP1G1O43747 822 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 PRAMEF11O60813 436 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 ITGAVP06756 1048 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 HNRNPA2B1P22626 353 aaKnown RBP33.68■■■□□ 2.98
CBX4-203ENST00000494546 EIF4A3P38919 411 aaKnown RBP33.68■■■□□ 2.98
CBX4-203ENST00000494546 ABL2P42684 1182 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 ZNF135P52742 658 aaPredicted RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms