RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GLDCP23378 1020 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 SMAD3P84022 425 aaKnown RBP16.74■□□□□ 0.27
ATG4B-225ENST00000494465 TMEM240Q5SV17 173 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 FSTL4Q6MZW2 842 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 CXorf57Q6NSI4 855 aaKnown RBP16.74■□□□□ 0.27
ATG4B-225ENST00000494465 OTOAQ7RTW8 1153 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 DCLK2Q8N568 766 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 ARL14EPQ8N8R7 260 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-225ENST00000494465 SEMA3CQ99985 751 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 SSX2IPQ9Y2D8 614 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 ASB3Q9Y575 518 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 DOCK6Q96HP0 2047 aa16.74■□□□□ 0.27
ATG4B-225ENST00000494465 LOC285095A0A1B0GVY8 99 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ILVBLA1L0T0 632 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 GFRA2O00451 464 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 KDELR3O43731 214 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 CXCL14O95715 111 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 CA8P35219 290 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 SPRP35270 261 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 FPGSQ05932 587 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 PABPC1LQ4VXU2 614 aaKnown RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 CNTN4Q8IWV2 1026 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 CNPY4Q8N129 248 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ARMC2Q8NEN0 867 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ACE2Q9BYF1 805 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 POLR1EQ9GZS1 481 aaKnown RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 EMCNQ9ULC0 261 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 MTCL1Q9Y4B5 1905 aaKnown RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 LCHNA4D1U4 455 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 CCT8L1PA6NM43 557 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 SCAMP3O14828 347 aaKnown RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 LATS1O95835 1130 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 GSRP00390 522 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ATXN1LP0C7T5 689 aaKnown RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 PDE1BQ01064 536 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 IL31Q6EBC2 164 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 Q6ZNB5 142 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 SETD3Q86TU7 594 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-225ENST00000494465 HS6ST3Q8IZP7 471 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 CCDC63Q8NA47 563 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ZBED2Q9BTP6 218 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 MECRQ9BV79 373 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ARL2BPQ9Y2Y0 163 aa16.73■□□□□ 0.27
ATG4B-225ENST00000494465 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 KIAA0754O94854 1291 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 VAPBO95292 243 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 PRKCGP05129 697 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 EN2P19622 333 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 BGNP21810 368 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 GABRB3P28472 473 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 GABRR2P28476 465 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ABCG1P45844 678 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 SERPINH1P50454 418 aaKnown RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CSE1LP55060 971 aaKnown RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ERVFC1P60507 584 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ZNF177Q13360 481 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CNGA3Q16281 694 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 PPM1JQ5JR12 505 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 SIRPB2Q5JXA9 342 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 STXBP5Q5T5C0 1151 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 HERC6Q8IVU3 1022 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ACVR1CQ8NER5 493 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ATXN7L3BQ96GX2 97 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 NSMCE3Q96MG7 304 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 RANBP9Q96S59 729 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 MGME1Q9BQP7 344 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 SNX15Q9NRS6 342 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 MTO1Q9Y2Z2 717 aaKnown RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CPQQ9Y646 472 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 RHOCP08134 193 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 HDCP19113 662 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 GMPRP36959 345 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CSRP3P50461 194 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CYP4F8P98187 520 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ZNF235Q14590 738 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 RNF187Q5TA31 235 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CES4AQ5XG92 561 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 TMC7Q7Z402 723 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CMC1Q7Z7K0 106 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 OTUD6BQ8N6M0 293 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 ABCF3Q9NUQ8 709 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 SIRPGQ9P1W8 387 aa16.72■□□□□ 0.27
ATG4B-225ENST00000494465 CHD7Q9P2D1 2997 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 KLF11O14901 512 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 SIN3BO75182 1162 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 C8AP07357 584 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 OXCT1P55809 520 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 KIAA0930Q6ICG6 404 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-225ENST00000494465 CCDC121Q6ZUS5 278 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 TRPM8Q7Z2W7 1104 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 ZC3HC1Q86WB0 502 aaKnown RBP16.71■□□□□ 0.27
ATG4B-225ENST00000494465 VPS39Q96JC1 886 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 RMDN2Q96LZ7 410 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 PSKH2Q96QS6 385 aa16.71■□□□□ 0.27
ATG4B-225ENST00000494465 DDX50Q9BQ39 737 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms