RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CLSTN2Q9H4D0 955 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 ACP6Q9NPH0 428 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 RXFP3Q9NSD7 469 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 CLEC4EQ9ULY5 219 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 CNTN6Q9UQ52 1028 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 HBS1LQ9Y450 684 aaKnown RBP8.4□□□□□ -1.06
RIF1-211ENST00000494333 PCDHGA5Q9Y5G8 931 aa8.4□□□□□ -1.06
RIF1-211ENST00000494333 A0A1W2PQF6 199 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 BCLAF3A2AJT9 711 aaKnown RBP8.39□□□□□ -1.07
RIF1-211ENST00000494333 MSI1O43347 362 aaKnown RBP8.39□□□□□ -1.07
RIF1-211ENST00000494333 THAP12O43422 761 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 MED7O43513 233 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 FBXO21O94952 628 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 CAVIN2O95810 425 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 LTFP02788 710 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 NCAM1P13591 858 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 GABRG2P18507 467 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 PON1P27169 355 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 P2RY2P41231 377 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 LAPTM5Q13571 262 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 BYSLQ13895 437 aaKnown RBP8.39□□□□□ -1.07
RIF1-211ENST00000494333 KIR3DS1Q14943 382 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 EXOC3L4Q17RC7 722 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 GEN1Q17RS7 908 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 PRSS53Q2L4Q9 553 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 DPCR1Q3MIW9 517 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 HSP90AA4PQ58FG1 418 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 PMS2CLQ68D20 193 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 TCEAL6Q6IPX3 200 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 DENND1BQ6P3S1 775 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 GALNT18Q6P9A2 607 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 CPNE8Q86YQ8 564 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 JAMLQ86YT9 394 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 TMEM145Q8NBT3 493 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 IPO4Q8TEX9 1081 aaKnown RBP8.39□□□□□ -1.07
RIF1-211ENST00000494333 FAM168AQ92567 244 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 TCEAL3Q969E4 200 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 FAM81BQ96LP2 452 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 GABRG3Q99928 467 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 NUP62CLQ9H1M0 184 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 VPS45Q9NRW7 570 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 SLC27A6Q9Y2P4 619 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 RAD54BQ9Y620 910 aa8.39□□□□□ -1.07
RIF1-211ENST00000494333 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
RIF1-211ENST00000494333 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 GOLGA6L7A0A1B0GV03 622 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 MED19A0JLT2 244 aaPredicted RBP8.38□□□□□ -1.07
RIF1-211ENST00000494333 GTPBP10A4D1E9 387 aaKnown RBP8.38□□□□□ -1.07
RIF1-211ENST00000494333 BECN2A8MW95 431 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 CAPN9O14815 690 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 SLC30A4O14863 429 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 CPP00450 1065 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 FYNP06241 537 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 GLI1P08151 1106 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 ACADSBP45954 432 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 RPL34P49207 117 aaKnown RBP8.38□□□□□ -1.07
RIF1-211ENST00000494333 SLC11A2P49281 568 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 TBX4P57082 545 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 MAN2A1Q16706 1144 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 ADGRF1Q5T601 910 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 YOD1Q5VVQ6 348 aaPredicted RBP8.38□□□□□ -1.07
RIF1-211ENST00000494333 MSANTD2Q6P1R3 559 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 CLEC17AQ6ZS10 378 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 LPCAT2Q7L5N7 544 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 ANKS1BQ7Z6G8 1248 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 FAM114A1Q8IWE2 563 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 UNC45BQ8IWX7 931 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 FAM217AQ8IXS0 508 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 TMEFF1Q8IYR6 380 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 DEFB119Q8N690 84 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 UCMAQ8WVF2 138 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 PIGKQ92643 395 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 FAM149B1Q96BN6 582 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 PIWIL1Q96J94 861 aaKnown RBP8.38□□□□□ -1.07
RIF1-211ENST00000494333 TUBGCP2Q9BSJ2 902 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 SLC2A11Q9BYW1 496 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 CIPCQ9C0C6 399 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 NDST4Q9H3R1 872 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 THAP9Q9H5L6 903 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 LMBRD1Q9NUN5 540 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 ELOVL2Q9NXB9 296 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 CALCOCO1Q9P1Z2 691 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 IMPACTQ9P2X3 320 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 MBD1Q9UIS9 605 aaPredicted RBP8.38□□□□□ -1.07
RIF1-211ENST00000494333 STOML2Q9UJZ1 356 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 DNAJC12Q9UKB3 198 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 NAALADL1Q9UQQ1 740 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 STON1Q9Y6Q2 735 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 MYH10P35580 1976 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 SDK1Q7Z5N4 2213 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 MYOFQ9NZM1 2061 aa8.38□□□□□ -1.07
RIF1-211ENST00000494333 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 ZNF503-AS2A6NEH8 195 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 E5RJQ4 531 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 FOXN3O00409 490 aaPredicted RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 PES1O00541 588 aaKnown RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 PAPSS1O43252 624 aaPredicted RBP8.37□□□□□ -1.07
RIF1-211ENST00000494333 PRODHO43272 600 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 TIMM44O43615 452 aa8.37□□□□□ -1.07
RIF1-211ENST00000494333 ACSL4O60488 711 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms