RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 LCMT1Q9UIC8 334 aa11.85□□□□□ -0.51
UBA3-211ENST00000493957 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 ZSCAN5CA6NGD5 496 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 FAM47DPA6NHR8 397 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 GOLGA6L6A8MZA4 724 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 KPNA3O00505 521 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 MUSKO15146 869 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 ALOX15BO15296 676 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 IPO7O95373 1038 aaKnown RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 SEMA4FO95754 770 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 PEX11BO96011 259 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 C5AR1P21730 350 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 OXTRP30559 389 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 SLC1A1P43005 524 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 ADPRHP54922 357 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 TAS2R38P59533 333 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 RHOAP61586 193 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 CCZ1BP86790 482 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 GBE1Q04446 702 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 PDK2Q15119 407 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 PLA2G2CQ5R387 149 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 AGBL4Q5VU57 503 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 DCAF12L1Q5VU92 463 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 C11orf63Q6NUN7 778 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 NCEH1Q6PIU2 408 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 MFSD7Q6UXD7 560 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 NPNTQ6UXI9 565 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 USP30Q70CQ3 517 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 DAAM2Q86T65 1068 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 RHOT1Q8IXI2 618 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 RYBPQ8N488 228 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 ANKK1Q8NFD2 765 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 OR2AP1Q8NGE2 309 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 FAM131CQ96AQ9 280 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 ISG20Q96AZ6 181 aaKnown RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 NSMCE3Q96MG7 304 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 BTBD1Q9H0C5 482 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 LUC7LQ9NQ29 371 aaKnown RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 HECAQ9UBI9 543 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 EVLQ9UI08 416 aaPredicted RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 IPO11Q9UI26 975 aaKnown RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.84□□□□□ -0.51
UBA3-211ENST00000493957 CABIN1Q9Y6J0 2220 aa11.84□□□□□ -0.51
UBA3-211ENST00000493957 CXorf51AA0A1B0GTR3 108 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 MACROD2A1Z1Q3 448 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 METTL12A8MUP2 240 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 BTNL10A8MVZ5 291 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 MEI4A8MW99 385 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 C1QTNF3-AMACRE9PGA6 284 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 KRIT1O00522 736 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 MAFKO60675 156 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 FSBPO95073 299 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 GSRP00390 522 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 RECQLP46063 649 aaPredicted RBP11.83□□□□□ -0.52
UBA3-211ENST00000493957 GEMIN4P57678 1058 aaKnown RBP11.83□□□□□ -0.52
UBA3-211ENST00000493957 PPP2CBP62714 309 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 PPP2CAP67775 309 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 IL10RBQ08334 325 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 SLC10A7Q0GE19 358 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 PAFAH1B3Q15102 231 aaKnown RBP11.83□□□□□ -0.52
UBA3-211ENST00000493957 INO80DQ53TQ3 878 aaPredicted RBP11.83□□□□□ -0.52
UBA3-211ENST00000493957 PIP5KL1Q5T9C9 394 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 LRRC38Q5VT99 294 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 PARS2Q7L3T8 475 aaKnown RBP11.83□□□□□ -0.52
UBA3-211ENST00000493957 DSG4Q86SJ6 1040 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 PGBD5Q8N414 524 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 LZTR1Q8N653 840 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 PLD5Q8N7P1 536 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 LRRC57Q8N9N7 239 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 TSEN2Q8NCE0 465 aaKnown RBP11.83□□□□□ -0.52
UBA3-211ENST00000493957 TMIEQ8NEW7 156 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 SNX19Q92543 992 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 CCDC114Q96M63 670 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 RNF157Q96PX1 679 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 PILRBQ9UKJ0 227 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 NCKAP1Q9Y2A7 1128 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 ADGRG1Q9Y653 693 aa11.83□□□□□ -0.52
UBA3-211ENST00000493957 C10orf142B7Z368 130 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 PSTPIP1O43586 416 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 GDF9O60383 454 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 PALMO75781 387 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 PIGNO95427 931 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 IGSF6O95976 241 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 PRNPP04156 253 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 UGT2B4P06133 528 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 IGHV4-34P06331 123 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 KRT10P13645 584 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 CDKN2BP42772 138 aa11.82□□□□□ -0.52
UBA3-211ENST00000493957 NAP1L1P55209 391 aaKnown RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 SNRPD1P62314 119 aaKnown RBP11.82□□□□□ -0.52
UBA3-211ENST00000493957 DYNLT1P63172 113 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms