RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 HIPK3Q9H422 1215 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 POLR1BQ9H9Y6 1135 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 NFKBIL1Q9UBC1 381 aaPredicted RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 WNT6Q9Y6F9 365 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 A0A0A0MQY5 61 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 FRMD3A2A2Y4 597 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 TMEM191CA6NGB0 347 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 CBY3A6NI87 242 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 SNAP23O00161 211 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 TAF4O00268 1085 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 BEST1O76090 585 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 TFEBP19484 476 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 NNMTP40261 264 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 GABRB2P47870 512 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 GNAQP50148 359 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 IFI35P80217 286 aaPredicted RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 CEBPZQ03701 1054 aaKnown RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 AIMP2Q13155 320 aaKnown RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 VEPH1Q14D04 833 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 RNPS1Q15287 305 aaKnown RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 TBC1D9BQ66K14 1250 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 CYB5R4Q7L1T6 521 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMC2-205ENST00000493955 ARL14EPQ8N8R7 260 aaPredicted RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 PNLDC1Q8NA58 520 aaKnown RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 YME1L1Q96TA2 773 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 DUSP26Q9BV47 211 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 AP1M1Q9BXS5 423 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 ASB6Q9NWX5 421 aa6.49□□□□□ -1.37
SMC2-205ENST00000493955 CHORDC1Q9UHD1 332 aaPredicted RBP6.49□□□□□ -1.37
SMC2-205ENST00000493955 MST1RQ04912 1400 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 CYP2D7A0A087X1C5 515 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 A0A1W2PRG0 241 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 SLC22A23A1A5C7 686 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 A8MZ25 164 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 OR2C1O95371 312 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 ADRB2P07550 413 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 NR2F1P10589 423 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 CYP2A6P11509 494 aaPredicted RBP6.48□□□□□ -1.37
SMC2-205ENST00000493955 INSRRP14616 1297 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 MCM3P25205 808 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 KLRC2P26717 231 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 YWHAQP27348 245 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 GCH1P30793 250 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 EIF2DP41214 584 aaKnown RBP6.48□□□□□ -1.37
SMC2-205ENST00000493955 CDH8P55286 799 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 YPEL5P62699 121 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 NIPAL4Q0D2K0 466 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 HIST2H2ACQ16777 129 aaPredicted RBP6.48□□□□□ -1.37
SMC2-205ENST00000493955 SUMO4Q6EEV6 95 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 Q6ZPA2 131 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 CHST9Q7L1S5 443 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 ZNF627Q7L945 461 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 GSTA5Q7RTV2 222 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 PRPF39Q86UA1 669 aaKnown RBP6.48□□□□□ -1.37
SMC2-205ENST00000493955 CCDC25Q86WR0 208 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 ZNF398Q8TD17 642 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 PSPC1Q8WXF1 523 aaKnown RBP6.48□□□□□ -1.37
SMC2-205ENST00000493955 KAT2AQ92830 837 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 JAKMIP2Q96AA8 810 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 ZNF747Q9BV97 191 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 TXLNGYQ9BZA5 131 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 ACTR5Q9H9F9 607 aaPredicted RBP6.48□□□□□ -1.37
SMC2-205ENST00000493955 HAO1Q9UJM8 370 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 PACSIN3Q9UKS6 424 aa6.48□□□□□ -1.37
SMC2-205ENST00000493955 ADGRF5Q8IZF2 1346 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 A0A1W2PQ09 198 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 ERAL1O75616 437 aaKnown RBP6.47□□□□□ -1.37
SMC2-205ENST00000493955 IPO7O95373 1038 aaKnown RBP6.47□□□□□ -1.37
SMC2-205ENST00000493955 EDN2P20800 178 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 IL11P20809 199 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 UBA7P41226 1012 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 SLC12A2P55011 1212 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 PPP2R5BQ15173 497 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 GKAP1Q5VSY0 366 aaPredicted RBP6.47□□□□□ -1.37
SMC2-205ENST00000493955 TSSK4Q6SA08 328 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 C1orf74Q96LT6 269 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 PRRX2Q99811 253 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 EFHD1Q9BUP0 239 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 KLK15Q9H2R5 256 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 IKZF4Q9H2S9 585 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 ZNF304Q9HCX3 659 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 RRP7BPQ9NSQ0 103 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 SPATS2LQ9NUQ6 558 aaKnown RBP6.47□□□□□ -1.37
SMC2-205ENST00000493955 CTNNAL1Q9UBT7 734 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 TLK1Q9UKI8 766 aa6.47□□□□□ -1.37
SMC2-205ENST00000493955 FAM157AC9JC47 383 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 KIF1CO43896 1103 aaKnown RBP6.46□□□□□ -1.38
SMC2-205ENST00000493955 LCKP06239 509 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 PTPN2P17706 415 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 PIP4K2AP48426 406 aaPredicted RBP6.46□□□□□ -1.38
SMC2-205ENST00000493955 CLCNKBP51801 687 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 HDAC4P56524 1084 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 IRF3Q14653 427 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 PGM5Q15124 567 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 ALG11Q2TAA5 492 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 SYTL3Q4VX76 610 aa6.46□□□□□ -1.38
SMC2-205ENST00000493955 RAB41Q5JT25 222 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms