RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PMF1-BGLAPU3KQ54 211 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MAPKBP1O60336 1514 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RPLP2P05387 115 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 DBIP07108 87 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MAGEA12P43365 314 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 NR2C2P49116 596 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TAS2R41P59536 307 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 EIF5AP63241 154 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PAN2Q504Q3 1202 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 LCN1P1Q5VSP4 162 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 LRRC69Q6ZNQ3 347 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 BEND5Q7L4P6 421 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 LZTR1Q8N653 840 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 EIF1ADQ8N9N8 165 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GPRC5AQ8NFJ5 357 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TNFAIP8L1Q8WVP5 186 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF75CPQ92670 426 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 C11orf24Q96F05 449 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TMEM176AQ96HP8 235 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TTLL2Q9BWV7 592 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SENP6Q9GZR1 1112 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CYP3A43Q9HB55 503 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 INTS10Q9NVR2 710 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 DMTF1Q9Y222 760 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 LAMC3Q9Y6N6 1575 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 OPLAHO14841 1288 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 AVILO75366 819 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 NTRK1P04629 796 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GZMAP12544 262 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 HOXB6P17509 224 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RAP1GAPP47736 663 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF157P51786 506 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 IRF8Q02556 426 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 DEF8Q6ZN54 512 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TTC7BQ86TV6 843 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RXFP2Q8WXD0 754 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SLC47A1Q96FL8 570 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PPP3R2Q96LZ3 170 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 C12orf66Q96MD2 445 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SLC6A15Q9H2J7 730 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 FBXO44Q9H4M3 255 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 IFT46Q9NQC8 304 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MTMR4Q9NYA4 1195 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GPN3Q9UHW5 284 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 NUP50Q9UKX7 468 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TRIM17Q9Y577 477 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 OAS3Q9Y6K5 1087 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CNTNAP2Q9UHC6 1331 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 FAM86C2PA6NEL3 165 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 APOL3O95236 402 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NADKO95544 446 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SNRPB2P08579 225 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 KCNA5P22460 613 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 OR1E1P30953 314 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 GRK5P34947 590 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 IGFALSP35858 605 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 DNASE1L1P49184 302 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ABRQ12979 859 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 INSCQ1MX18 579 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PRR23BQ6ZRT6 265 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TMC3Q7Z5M5 1100 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SLCO6A1Q86UG4 719 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 AMIGO1Q86WK6 493 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TRAPPC5Q8IUR0 188 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF567Q8N184 647 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 OR2L3Q8NG85 312 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CSGALNACT1Q8TDX6 532 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 HTR3CQ8WXA8 447 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CLK4Q9HAZ1 481 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NYAP2Q9P242 653 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PCDHGB3Q9Y5G1 929 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 AK5Q9Y6K8 562 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ASXL2Q76L83 1435 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TTC34A8MYJ7 566 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 GCATO75600 419 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NPR2P20594 1047 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 DLG4P78352 724 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ELAVL2Q12926 359 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 HECTD3Q5T447 861 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ARMC12Q5T9G4 340 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 WDR59Q6PJI9 974 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 GCNT7Q6ZNI0 430 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PLCZ1Q86YW0 608 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ZDHHC17Q8IUH5 632 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SPERTQ8NA61 448 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 MCFD2Q8NI22 146 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 DNAJA4Q8WW22 397 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CKAP2Q8WWK9 683 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CELF6Q96J87 481 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 APBA2Q99767 749 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 KCNS3Q9BQ31 491 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 GORASP1Q9BQQ3 440 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 FUT8Q9BYC5 575 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 DCLK3Q9C098 648 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TMEM51Q9NW97 253 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 EMC3Q9P0I2 261 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms