RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 MAN1A1P33908 653 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 CYLC1P35663 651 aaPredicted RBP7.09□□□□□ -1.27
TOP3A-207ENST00000493648 RENBPP51606 427 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 NEK3P51956 506 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 METAP1P53582 386 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 CDH6P55285 790 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 C21orf59P57076 290 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 SLC25A11Q02978 314 aaKnown RBP7.09□□□□□ -1.27
TOP3A-207ENST00000493648 IL10RBQ08334 325 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 SLC14A1Q13336 389 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 DPYSQ14117 519 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 MESDQ14696 234 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 GRM3Q14832 879 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PDK2Q15119 407 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 CYTH1Q15438 398 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 SPA17Q15506 151 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF805Q5CZA5 627 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 ZFYVE27Q5T4F4 411 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PIP5KL1Q5T9C9 394 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TMCO4Q5TGY1 634 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 AGBL4Q5VU57 503 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 AFMIDQ63HM1 303 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 GDPD4Q6W3E5 623 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TRIM69Q86WT6 500 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 GAS2L3Q86XJ1 694 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TMTC1Q8IUR5 882 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 CCDC170Q8IYT3 715 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 MINDY1Q8N5J2 469 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TC2NQ8N9U0 490 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 GRIN3AQ8TCU5 1115 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 NSMCE1Q8WV22 266 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 RAB7BQ96AH8 199 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 ARRDC3Q96B67 414 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 FEM1CQ96JP0 617 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 SERAC1Q96JX3 654 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 CSPG4P5Q96PW8 444 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PANX2Q96RD6 677 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 KLC2Q9H0B6 622 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 SLC32A1Q9H598 525 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 SP110Q9HB58 689 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 PCDH18Q9HCL0 1135 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 TM9SF3Q9HD45 589 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 FSCN3Q9NQT6 498 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 AASDHPPTQ9NRN7 309 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 RCOR3Q9P2K3 495 aaPredicted RBP7.09□□□□□ -1.27
TOP3A-207ENST00000493648 DMTF1Q9Y222 760 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 MFHAS1Q9Y4C4 1052 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
TOP3A-207ENST00000493648 C16orf96A6NNT2 1141 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 UPK3BL1B0FP48 263 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 UPK3BL2E5RIL1 263 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 PRAMEF26H0Y7S4 382 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 VILLO15195 856 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 LATO43561 262 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 MAGEC1O60732 1142 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 MTA2O94776 668 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 IPO7O95373 1038 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 UGT2B4P06133 528 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ADRB3P13945 408 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 CSRP1P21291 193 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 CD38P28907 300 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 MAT2AP31153 395 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 GKP32189 559 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 SERPINB6P35237 376 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 GJC1P36383 396 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 SLC1A1P43005 524 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 MAGEA1P43355 309 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 NOP2P46087 812 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 GRIA4P48058 902 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 TAS2R38P59533 333 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 NSUN2Q08J23 767 aaKnown RBP eCLIP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 GRIK2Q13002 908 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 RFTN1Q14699 578 aaPredicted RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 STAT4Q14765 748 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 TCEAL1Q15170 157 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 KIF19Q2TAC6 998 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 HLA-BQ31612 363 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ATP13A4Q4VNC1 1196 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 SETMARQ53H47 684 aaPredicted RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ODF2Q5BJF6 829 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 PPM1JQ5JR12 505 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ATXN7L2Q5T6C5 722 aaPredicted RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 TXNRD3NBQ6F5E7 133 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 TTC7BQ86TV6 843 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ZSCAN30Q86W11 494 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 HORMAD1Q86X24 394 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 LRRC49Q8IUZ0 686 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ARHGAP12Q8IWW6 846 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 BBS5Q8N3I7 341 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 OR6K2Q8NGY2 324 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 FAM71BQ8TC56 605 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 HCAR2Q8TDS4 363 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 RFFLQ8WZ73 363 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 KLHL32Q96NJ5 620 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ZNF599Q96NL3 588 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 CALN1Q9BXU9 219 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 CPEB1Q9BZB8 566 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 GAREM1Q9H706 876 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 EBF2Q9HAK2 575 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms