RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 PSMD8P48556 350 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 CSNK1DP48730 415 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 RENBPP51606 427 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 GDF10P55107 478 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 SNRPD1P62314 119 aaKnown RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 CSTF1Q05048 431 aaKnown RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 NIPAL4Q0D2K0 466 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 SNX1Q13596 522 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 OASLQ15646 514 aaKnown RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 POM121L1PQ3SYA9 428 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 ZNF776Q68DI1 518 aaPredicted RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 ALG1LQ6GMV1 187 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 DARS2Q6PI48 645 aaKnown RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 SRLQ86TD4 932 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 TMPRSS6Q8IU80 811 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 MMAAQ8IVH4 418 aaKnown RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 ARRDC2Q8TBH0 407 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 GRIN3AQ8TCU5 1115 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 NSMCE1Q8WV22 266 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 HTR3CQ8WXA8 447 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 NKD2Q969F2 451 aaPredicted RBP12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 HEPHQ9BQS7 1158 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 AP1M1Q9BXS5 423 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 ZDHHC6Q9H6R6 413 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 FBRSQ9HAH7 460 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 EBF1Q9UH73 591 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 SAR1BQ9Y6B6 198 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 ZNF318Q5VUA4 2279 aa12.28□□□□□ -0.44
RHBDF1-211ENST00000493647 PLK4O00444 970 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 KRIT1O00522 736 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 ALOX15BO15296 676 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 MID1O15344 667 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 KCNN4O15554 427 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 LEFTY1O75610 366 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 PIGNO95427 931 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 POP4O95707 220 aaKnown RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 HOXA6P31267 233 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 HSPA9P38646 679 aaKnown RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 RECQLP46063 649 aaPredicted RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 FNTBP49356 437 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 DSC2Q02487 901 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 NSUN2Q08J23 767 aaKnown RBP eCLIP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 ANGPT1Q15389 498 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 CST6Q15828 149 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 CCNG2Q16589 344 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 KCTD19Q17RG1 926 aaPredicted RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 TEX44Q53QW1 395 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 HEATR6Q6AI08 1181 aaKnown RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 TTC27Q6P3X3 843 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 NCEH1Q6PIU2 408 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 KIAA1324Q6UXG2 1013 aaKnown RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 ZNF567Q8N184 647 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 CAMKK1Q8N5S9 505 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 FAM71DQ8N9W8 422 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 TMIEQ8NEW7 156 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 PIP4K2CQ8TBX8 421 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 NELL1Q92832 810 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 ARRDC3Q96B67 414 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 TEKT5Q96M29 485 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 CCDC114Q96M63 670 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 AGAP3Q96P47 875 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 NUDCD1Q96RS6 583 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 TMEM121Q9BTD3 319 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 FRMD8P1Q9BZ68 369 aaPredicted RBP12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 TPSD1Q9BZJ3 242 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 NOD2Q9HC29 1040 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 IL36AQ9UHA7 158 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 FBXO4Q9UKT5 387 aa12.27□□□□□ -0.45
RHBDF1-211ENST00000493647 F5H423 210 aaPredicted RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 ZBTB24O43167 697 aaPredicted RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 MTSS1O43312 755 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 ALDH1A2O94788 518 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 IL1BP01584 269 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 MMP2P08253 660 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 SP9P0CG40 484 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 KCNJ1P48048 391 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 SCNN1BP51168 640 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 CYP1B1Q16678 543 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 DRICH1Q6PGQ1 229 aaPredicted RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 PRUNE1Q86TP1 453 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 PRPF39Q86UA1 669 aaKnown RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 CAMK1DQ8IU85 385 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 BBS5Q8N3I7 341 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 AADATQ8N5Z0 425 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 GLIS1Q8NBF1 620 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 SIPA1Q96FS4 1042 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 SEMA3CQ99985 751 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 GORASP1Q9BQQ3 440 aa12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 CPEB1Q9BZB8 566 aaKnown RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 POLR1EQ9GZS1 481 aaKnown RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 PABPC3Q9H361 631 aaKnown RBP12.26□□□□□ -0.45
RHBDF1-211ENST00000493647 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms