RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SAGE2PA6NJ88 616 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 AGRPO00253 132 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 PLOD2O00469 737 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 NFIBO00712 420 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SHOXO15266 292 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 AKAP10O43572 662 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SLC9A1P19634 815 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 BTF3P20290 206 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 PIK3R1P27986 724 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ALDH4A1P30038 563 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 FKBP3Q00688 224 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 BST1Q10588 318 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 BTN1A1Q13410 526 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 PLEKHG6Q3KR16 790 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 MTX3Q5HYI7 312 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 VARS2Q5ST30 1063 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SLFN11Q7Z7L1 901 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 OFCC1Q8IZS5 231 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 EID3Q8N140 333 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 CERS5Q8N5B7 392 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SEPT8Q92599 483 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 CIDECQ96AQ7 238 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 CALML4Q96GE6 196 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 RMDN3Q96TC7 470 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 MECRQ9BV79 373 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 BEX2Q9BXY8 128 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 TRIM9Q9C026 710 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 CCDC90BQ9GZT6 254 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF395Q9H8N7 513 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SP110Q9HB58 689 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SUCOQ9UBS9 1254 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ZC3H7BQ9UGR2 993 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ADGRE2Q9UHX3 823 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ANK1P16157 1881 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 BAZ2BQ9UIF8 2168 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 C7orf72A4D263 438 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 E5RJQ4 531 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 PI4K2BG5E9Z4 385 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 PI15O43692 258 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 NOL4O94818 638 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 GGPS1O95749 300 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 CLIC3O95833 236 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 APBA3O96018 575 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ASS1P00966 412 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ERBB2P04626 1255 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ITGB3P05106 788 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 DNAJB2P25686 324 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 MLLT10P55197 1068 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ERVK-21P61565 698 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 IFITM3Q01628 133 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 PUDPQ08623 228 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ILF2Q12905 390 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 EFR3AQ14156 821 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SPATS1Q496A3 300 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 IFIT1BQ5T764 474 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 RAP1GAP2Q684P5 730 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 RINT1Q6NUQ1 792 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SYCE2Q6PIF2 218 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF654Q8IZM8 581 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 NAT16Q8N8M0 369 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 OR6P1Q8NGX9 317 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SLC13A1Q9BZW2 595 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SCUBE2Q9NQ36 999 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ENTPD7Q9NQZ7 604 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 SPATA6Q9NWH7 488 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 ADA2Q9NZK5 511 aa6.94□□□□□ -1.3
VPS13B-205ENST00000493587 DIMT1Q9UNQ2 313 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 WBP11Q9Y2W2 641 aaKnown RBP6.94□□□□□ -1.3
VPS13B-205ENST00000493587 CLRN2A0PK11 232 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 E5RI56 91 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 BTN3A3O00478 584 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 PITPNM1O00562 1244 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TYROBPO43914 113 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ALDH1A2O94788 518 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 IFNB1P01574 187 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ITGA2P17301 1181 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CKMT2P17540 419 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 RPL9P32969 192 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CDH5P33151 784 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TXNL4AP83876 142 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ART3Q13508 389 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 GRM7Q14831 915 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TAF1CQ15572 869 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 GPR68Q15743 365 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 MGAT5BQ3V5L5 792 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 KCNT2Q6UVM3 1135 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 C16orf86Q6ZW13 317 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SPATC1Q76KD6 591 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SV2BQ7L1I2 683 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 PAGE2Q7Z2X7 111 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 CAMK1DQ8IU85 385 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 C12orf56Q8IXR9 622 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 PALM2Q8IXS6 379 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 SP8Q8IXZ3 490 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 LGI2Q8N0V4 545 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 PARP8Q8N3A8 854 aa6.93□□□□□ -1.3
VPS13B-205ENST00000493587 TDRD5Q8NAT2 981 aaKnown RBP6.93□□□□□ -1.3
VPS13B-205ENST00000493587 ZBTB44Q8NCP5 570 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms