RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ITGAVP06756 1048 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 ETS1P14921 441 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 RECQLP46063 649 aaPredicted RBP17.45■□□□□ 0.38
LIME1-208ENST00000493265 RGRP47804 291 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 FZD5Q13467 585 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 TUBB2AQ13885 445 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 TRIP13Q15645 432 aaPredicted RBP17.45■□□□□ 0.38
LIME1-208ENST00000493265 HNRNPA1L2Q32P51 320 aaKnown RBP17.45■□□□□ 0.38
LIME1-208ENST00000493265 PID1Q7Z2X4 250 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 ZNF567Q8N184 647 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 PGBD5Q8N414 524 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 DCLK2Q8N568 766 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 CCDC89Q8N998 374 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 C12orf50Q8NA57 414 aaPredicted RBP17.45■□□□□ 0.38
LIME1-208ENST00000493265 SPATA4Q8NEY3 305 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 CCDC110Q8TBZ0 833 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 FRS2Q8WU20 508 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 KRT12Q99456 494 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 IL12RB2Q99665 862 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 TUBB2BQ9BVA1 445 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 CEP44Q9C0F1 390 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 TMEM245Q9H330 911 aa17.45■□□□□ 0.38
LIME1-208ENST00000493265 DNAH14Q0VDD8 3507 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 F5P12259 2224 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 MED19A0JLT2 244 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 CFAP69A5D8W1 941 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 NPC1O15118 1278 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 ZBTB24O43167 697 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 ADAM23O75077 832 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 SIN3BO75182 1162 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 ZNF821O75541 412 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 IGSF6O95976 241 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 CHRM1P11229 460 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 HOXB2P14652 356 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 CHRNA3P32297 505 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 SCNN1BP51168 640 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 CYP1B1Q16678 543 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 TEX44Q53QW1 395 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 CARD16Q5EG05 197 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 DRICH1Q6PGQ1 229 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 DGLUCYQ7Z3D6 616 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 METTL3Q86U44 580 aaKnown RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 CACUL1Q86Y37 369 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 MAML2Q8IZL2 1156 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 STK40Q8N2I9 435 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 SYNPOQ8N3V7 929 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 TEX26Q8N6G2 289 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 PCDH20Q8N6Y1 951 aaKnown RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 CNTD1Q8N815 330 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 KDM1BQ8NB78 822 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 ATL2Q8NHH9 583 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 KCNV2Q8TDN2 545 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 FATE1Q969F0 183 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 GDAP1L1Q96MZ0 367 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 PSKH2Q96QS6 385 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 SPATA6Q9NWH7 488 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 HECAQ9UBI9 543 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 SUN2Q9UH99 717 aa17.44■□□□□ 0.38
LIME1-208ENST00000493265 EVLQ9UI08 416 aaPredicted RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
LIME1-208ENST00000493265 CXorf51AA0A1B0GTR3 108 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 CCDC188H7C350 402 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 INSIG1O15503 277 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 ZSCAN5DPP0CG00 497 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 NFKB1P19838 968 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 GKP32189 559 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 SNRPD1P62314 119 aaKnown RBP17.43■□□□□ 0.38
LIME1-208ENST00000493265 MRPS25P82663 173 aaKnown RBP17.43■□□□□ 0.38
LIME1-208ENST00000493265 DSC2Q02487 901 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 GAS6Q14393 721 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 STARD3Q14849 445 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 EOGTQ5NDL2 527 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 ANKRD20A2Q5SQ80 823 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 ANKRD20A1Q5TYW2 823 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 ANKRD20A3Q5VUR7 823 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 KIAA1211LQ6NV74 962 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 DPY19L3Q6ZPD9 716 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 ARHGEF18Q6ZSZ5 1173 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 GLIS1Q8NBF1 620 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 CHST14Q8NCH0 376 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 OR2AP1Q8NGE2 309 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 GRIN3AQ8TCU5 1115 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 RUBCNQ92622 972 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 PTPRN2Q92932 1015 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 ISG20Q96AZ6 181 aaKnown RBP17.43■□□□□ 0.38
LIME1-208ENST00000493265 TEKT5Q96M29 485 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 SEMA3CQ99985 751 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 OSBPL6Q9BZF3 934 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 POLR1EQ9GZS1 481 aaKnown RBP17.43■□□□□ 0.38
LIME1-208ENST00000493265 ZDHHC6Q9H6R6 413 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 SCUBE2Q9NQ36 999 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 PRSS16Q9NQE7 514 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 HAUS2Q9NVX0 235 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 RSPH14Q9UHP6 348 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 MMP17Q9ULZ9 603 aa17.43■□□□□ 0.38
LIME1-208ENST00000493265 CEP250Q9BV73 2442 aa17.42■□□□□ 0.38
LIME1-208ENST00000493265 GSRP00390 522 aa17.42■□□□□ 0.38
LIME1-208ENST00000493265 STIP1P31948 543 aaKnown RBP17.42■□□□□ 0.38
LIME1-208ENST00000493265 ACTN2P35609 894 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms