RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ZNF662Q6ZS27 426 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 ALYREFQ86V81 257 aaKnown RBP14.18□□□□□ -0.14
CCM2-217ENST00000492883 RGL4Q8IZJ4 473 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 TSEN2Q8NCE0 465 aaKnown RBP14.18□□□□□ -0.14
CCM2-217ENST00000492883 CADM4Q8NFZ8 388 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 FOXJ1Q92949 421 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 ZNF419Q96HQ0 510 aaPredicted RBP14.18□□□□□ -0.14
CCM2-217ENST00000492883 PDLIM2Q96JY6 352 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 HSPA12BQ96MM6 686 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 ARRDC1-AS1Q9H2J1 176 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 LHX3Q9UBR4 397 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
CCM2-217ENST00000492883 LRRC72A6NJI9 287 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 NEBLO76041 1014 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 DRD3P35462 400 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 PTGER3P43115 390 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 PEX5P50542 639 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 SCNN1BP51168 640 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 COPS2P61201 443 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 NSUN2Q08J23 767 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCM2-217ENST00000492883 GRM3Q14832 879 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 PDK1Q15118 436 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 TAZQ16635 292 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 CCDC181Q5TID7 509 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 NPNTQ6UXI9 565 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 BZW1Q7L1Q6 419 aaKnown RBP14.17□□□□□ -0.14
CCM2-217ENST00000492883 CYP2U1Q7Z449 544 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 SRLQ86TD4 932 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 DCLK2Q8N568 766 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 LRRN4Q8WUT4 740 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 PIGKQ92643 395 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 ARRDC3Q96B67 414 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 TSGA13Q96PP4 275 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 ALS2CR12Q96Q35 445 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 HEMGNQ9BXL5 484 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 OSBPL1AQ9BXW6 950 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 PACSIN2Q9UNF0 486 aaPredicted RBP14.17□□□□□ -0.14
CCM2-217ENST00000492883 PCDHGA5Q9Y5G8 931 aa14.17□□□□□ -0.14
CCM2-217ENST00000492883 hCG_1818297A0A087WSY0 165 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3DA0A087WVF3 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3IA0A087WXS9 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3EA0A087X179 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3KA0A087X1G2 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3FA6NER0 549 aaPredicted RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 METTL12A8MUP2 240 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 MEI4A8MW99 385 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3LB9A6J9 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 RNF103O00237 685 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 MATN3O15232 486 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 INSIG1O15503 277 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 SLC7A4O43246 635 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 FSBPO95073 299 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 EPN2O95208 641 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 PEX11BO96011 259 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 UGT2B4P06133 528 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3HP0C7X1 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TGM2P21980 687 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 HSPA9P38646 679 aaKnown RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 MMP13P45452 471 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 RGRP47804 291 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 CSNK1DP48730 415 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 NR2C2P49116 596 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 ADPRHP54922 357 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 ITKQ08881 620 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 AP1B1Q10567 949 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 HNRNPDQ14103 355 aaKnown RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 PPP2R5EQ16537 467 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 ZNF805Q5CZA5 627 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 WDR45BQ5MNZ6 344 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 DCAF12L1Q5VU92 463 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3GQ6DHY5 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3CQ6IPX1 549 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 FBXL19Q6PCT2 694 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 NCEH1Q6PIU2 408 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 ERN2Q76MJ5 926 aaKnown RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 CCDC13Q8IYE1 715 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 TBC1D3Q8IZP1 549 aaPredicted RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 PAF1Q8N7H5 531 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 OR2T34Q8NGX1 318 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 UBE2Q2Q8WVN8 375 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 SNX19Q92543 992 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 ALG3Q92685 438 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 P3H4Q92791 437 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 HDAC11Q96DB2 347 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 KLHL32Q96NJ5 620 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 PSKH2Q96QS6 385 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 LGMNQ99538 433 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 HDAC8Q9BY41 377 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 CPEB1Q9BZB8 566 aaKnown RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 PCED1AQ9H1Q7 454 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 C6orf106Q9H6K1 298 aaPredicted RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 HAUS2Q9NVX0 235 aa14.16□□□□□ -0.14
CCM2-217ENST00000492883 MUC22E2RYF6 1773 aaPredicted RBP14.16□□□□□ -0.14
CCM2-217ENST00000492883 BCLAF3A2AJT9 711 aaKnown RBP14.15□□□□□ -0.14
CCM2-217ENST00000492883 PPP1R12AO14974 1030 aaPredicted RBP14.15□□□□□ -0.14
CCM2-217ENST00000492883 MUSKO15146 869 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 PYGMP11217 842 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 CCNB1P14635 433 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms