RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 SPON2Q9BUD6 331 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 CALN1Q9BXU9 219 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 MAGEH1Q9H213 219 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 ATP13A1Q9HD20 1204 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 GOLGA6AQ9NYA3 693 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 MPP6Q9NZW5 540 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 AJAP1Q9UKB5 411 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-212ENST00000492407 RPS6KL1Q9Y6S9 549 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 TMEM131Q92545 1883 aa9.3□□□□□ -0.92
HDAC3-212ENST00000492407 K7ESM1 405 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 SRGAP2O75044 1071 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 SDC3O75056 442 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 POP4O95707 220 aaKnown RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 CD160O95971 181 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 CYP1A1P04798 512 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 PRLRP16471 622 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 TFE3P19532 575 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 MMP8P22894 467 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 ADRA1BP35368 520 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 FLT3P36888 993 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 GGCXP38435 758 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 PTPN9P43378 593 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 RPIAP49247 311 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 CCNHP51946 323 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 PCBP4P57723 403 aaKnown RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 SNRPD1P62314 119 aaKnown RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 YPEL5P62699 121 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 ARF5P84085 180 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 RAPGEF1Q13905 1077 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 PTK2BQ14289 1009 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 FZD2Q14332 565 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 POLD3Q15054 466 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 CAMK4Q16566 473 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 POM121L1PQ3SYA9 428 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 INO80DQ53TQ3 878 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF805Q5CZA5 627 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 MANEALQ5VSG8 457 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 SEL1L3Q68CR1 1132 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 LINGO4Q6UY18 593 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 TRIM72Q6ZMU5 477 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 STRADAQ7RTN6 431 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 TFAP2DQ7Z6R9 452 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 SLC22A18ASQ8N1D0 253 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 OR7D4Q8NG98 312 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 HCAR2Q8TDS4 363 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 CENPIQ92674 756 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 ARHGEF2Q92974 986 aaKnown RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 GLMNQ92990 594 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 HIC2Q96JB3 615 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 APOLD1Q96LR9 279 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 DPH1Q9BZG8 443 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 ABCG4Q9H172 646 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 TNKS2Q9H2K2 1166 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 POLR1BQ9H9Y6 1135 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 TMEM248Q9NWD8 314 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 UCKL1Q9NWZ5 548 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 HECAQ9UBI9 543 aaPredicted RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 OR12D3Q9UGF7 316 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 HPCAL4Q9UM19 191 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 CA5BQ9Y2D0 317 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 MFHAS1Q9Y4C4 1052 aa9.29□□□□□ -0.92
HDAC3-212ENST00000492407 SMG1Q96Q15 3661 aaKnown RBP9.29□□□□□ -0.92
HDAC3-212ENST00000492407 KNTC1P50748 2209 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 EME2A4GXA9 379 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 C16orf96A6NNT2 1141 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 TMEM110-MUSTN1A8MSY1 372 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 F8VZ95 297 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 ERVH48-1M5A8F1 160 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 TCEA3O75764 348 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 PAK4O96013 591 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 ITPKBP27987 946 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 SDC4P31431 198 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 NUMBP49757 651 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 GSCP56915 257 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 CLDN2P57739 230 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 PFN3P60673 137 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 NOMO3P69849 1222 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 CDR2Q01850 454 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 TLE3Q04726 772 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 RAD51Q06609 339 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 MYLK3Q32MK0 819 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 BROXQ5VW32 411 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 KDM7AQ6ZMT4 941 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 NOP9Q86U38 636 aaKnown RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 NLRP14Q86W24 1093 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 ZNF548Q8NEK5 533 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 OR2AP1Q8NGE2 309 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 GRIN3AQ8TCU5 1115 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 SLC39A7Q92504 469 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 KLK6Q92876 244 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 NTAN1Q96AB6 310 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 CFAP57Q96MR6 1250 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 FCRL3Q96P31 734 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 KLF6Q99612 283 aaPredicted RBP9.28□□□□□ -0.92
HDAC3-212ENST00000492407 C1QTNF7Q9BXJ2 289 aa9.28□□□□□ -0.92
HDAC3-212ENST00000492407 CLSTN2Q9H4D0 955 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms