RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 NR0B2Q15466 257 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 TGIF1Q15583 401 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 EFHC1Q5JVL4 640 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 TFAP2DQ7Z6R9 452 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 PASD1Q8IV76 773 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 FEM1CQ96JP0 617 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 PPP1R13BQ96KQ4 1090 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 LENG8Q96PV6 779 aaPredicted RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 CCNL2Q96S94 520 aaPredicted RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 LRRC61Q9BV99 259 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 DYRK4Q9NR20 520 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 ATXN7L1Q9ULK2 861 aaPredicted RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 ITM2BQ9Y287 266 aa13.48□□□□□ -0.25
USF1-206ENST00000491629 USP9YO00507 2555 aaPredicted RBP13.48□□□□□ -0.25
USF1-206ENST00000491629 IGLV3-10A0A075B6K4 115 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 CCDC187A0A096LP49 1063 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 PPP1R3GB7ZBB8 358 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 M0QYT0 321 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 MED7O43513 233 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 AP1G1O43747 822 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 DAB1O75553 588 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 ITGA2BP08514 1039 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 SLC5A2P31639 672 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 GKP32189 559 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 CLCN6P51797 869 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 ADKP55263 362 aaKnown RBP13.47□□□□□ -0.25
USF1-206ENST00000491629 ARF5P84085 180 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 CCDC15Q0P6D6 951 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 SLC26A9Q7LBE3 791 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 SETD3Q86TU7 594 aaPredicted RBP13.47□□□□□ -0.25
USF1-206ENST00000491629 ARL14Q8N4G2 192 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 TPCN2Q8NHX9 752 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 NT5C3BQ969T7 300 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 CENPTQ96BT3 561 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 CCDC97Q96F63 343 aaPredicted RBP13.47□□□□□ -0.25
USF1-206ENST00000491629 DHTKD1Q96HY7 919 aaPredicted RBP13.47□□□□□ -0.25
USF1-206ENST00000491629 CCDC114Q96M63 670 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 NPY6RQ99463 290 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 IL12RB2Q99665 862 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
USF1-206ENST00000491629 TKTL2Q9H0I9 626 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 STARD5Q9NSY2 213 aa13.47□□□□□ -0.25
USF1-206ENST00000491629 USP9XQ93008 2570 aaPredicted RBP13.47□□□□□ -0.25
USF1-206ENST00000491629 LMO7DNF2Z398 122 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 H3BM21 787 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 FPGTO14772 594 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 HGFP14210 728 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 NOS2P35228 1153 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 IGFALSP35858 605 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 SERPINH1P50454 418 aaKnown RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 CCNHP51946 323 aaPredicted RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 SLC6A3Q01959 620 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 PTPN20Q4JDL3 420 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 PRRT3Q5FWE3 981 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 C11orf57Q6ZUT1 292 aaPredicted RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 C1orf131Q8NDD1 294 aaKnown RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 EXTL1Q92935 676 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 LIN37Q96GY3 246 aaPredicted RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 PPP1R16AQ96I34 528 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 HEPHQ9BQS7 1158 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 EVA1BQ9NVM1 165 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 NCKIPSDQ9NZQ3 722 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 IPO11Q9UI26 975 aaKnown RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 MAN1B1Q9UKM7 699 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 PCDHGC3Q9UN70 934 aa13.46□□□□□ -0.25
USF1-206ENST00000491629 FCF1Q9Y324 198 aaKnown RBP13.46□□□□□ -0.25
USF1-206ENST00000491629 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 PSMA7O14818 248 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 PLD2O14939 933 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 YY2O15391 372 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 TSHRP16473 764 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 WT1P19544 449 aaPredicted RBP13.45□□□□□ -0.26
USF1-206ENST00000491629 UGT1A5P35504 534 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 MARSP56192 900 aaKnown RBP13.45□□□□□ -0.26
USF1-206ENST00000491629 CETN1Q12798 172 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 CARD16Q5EG05 197 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 COLEC12Q5KU26 742 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 TRNP1Q6NT89 227 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 PHACTR4Q8IZ21 702 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 PCDH20Q8N6Y1 951 aaKnown RBP13.45□□□□□ -0.26
USF1-206ENST00000491629 OR6K2Q8NGY2 324 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 ASB12Q8WXK4 309 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 TBCBQ99426 244 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 FOXP3Q9BZS1 431 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 ZDHHC6Q9H6R6 413 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 WDCPQ9H6R7 721 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 MBNL1Q9NR56 388 aaKnown RBP13.45□□□□□ -0.26
USF1-206ENST00000491629 NDFIP2Q9NV92 336 aa13.45□□□□□ -0.26
USF1-206ENST00000491629 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms