RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	XRCC1	P18887	633 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CD40LG	P29965	261 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	HOXA13	P31271	388 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	GRM5	P41594	1212 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	GK3P	Q14409	553 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SQLE	Q14534	574 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	C16orf87	Q6PH81	154 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	AGR3	Q8TD06	166 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CCDC68	Q9H2F9	335 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	PLXNB3	Q9ULL4	1909 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ACKR2	O00590	384 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SDHD	O14521	159 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	MED7	O43513	233 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SORBS2	O94875	1100 aa	Known RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	PEX6	Q13608	980 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	KYAT1	Q16773	422 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ARL13B	Q3SXY8	428 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ATP13A4	Q4VNC1	1196 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	DCUN1D2	Q6PH85	259 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	DENND5B	Q6ZUT9	1274 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	MIER3	Q7Z3K6	550 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	DPP10	Q8N608	796 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SEPT8	Q92599	483 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	OTUD5	Q96G74	571 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ASB2	Q96Q27	587 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SLC9A7	Q96T83	725 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	BRINP2	Q9C0B6	783 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CAAP1	Q9H8G2	361 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	KAT6A	Q92794	2004 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	TFPT	P0C1Z6	253 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	PSMC3	P17980	439 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	POLR2E	P19388	210 aa	Known RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	BMP8B	P34820	402 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	RYK	P34925	604 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	GRK3	P35626	688 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CRK	P46108	304 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ACVR1	Q04771	509 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SLC9B1	Q4ZJI4	515 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	XKR4	Q5GH76	650 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	STRADA	Q7RTN6	431 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	BMP8A	Q7Z5Y6	402 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	DEFB107A	Q8IZN7	70 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CHURC1	Q8WUH1	139 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	HOPX	Q9BPY8	73 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	MRPL46	Q9H2W6	279 aa	Known RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	FZD8	Q9H461	694 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	PXMP2	Q9NR77	195 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CACNA2D2	Q9NY47	1150 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ACTR3B	Q9P1U1	418 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	FNIP2	Q9P278	1114 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ENPP5	Q9UJA9	477 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ZNF112	Q9UJU3	913 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	DNAJC16	Q9Y2G8	782 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541		H0YIN7	160 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	GRIK1	P39086	918 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	IFITM2	Q01629	132 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	PRKAA1	Q13131	559 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ACOX1	Q15067	660 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	SLC27A3	Q5K4L6	730 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CENPS	Q8N2Z9	138 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	PCDH19	Q8TAB3	1148 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	HDAC2	Q92769	488 aa	Known RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	CSF3R	Q99062	836 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	C1orf50	Q9BV19	199 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	DBNDD1	Q9H9R9	158 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	STAP1	Q9ULZ2	295 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	USP22	Q9UPT9	525 aa		10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.42	□□□□□ -0.74
SREBF2-208	ENST00000491541	ZBTB42	B2RXF5	422 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	SLC16A6	O15403	523 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PRPSAP2	O60256	369 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	GABBR2	O75899	941 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	MYCL	P12524	364 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	POLR2B	P30876	1174 aa	Known RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	MSX2	P35548	267 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	GP5	P40197	560 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	HSPA14	Q0VDF9	509 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	DMP1	Q13316	513 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	HADH	Q16836	314 aa	Known RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	LPCAT2	Q7L5N7	544 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	HOMEZ	Q8IX15	550 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	RNF148	Q8N7C7	305 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PPP1R36	Q96LQ0	422 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	TRMO	Q9BU70	441 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PAIP1	Q9H074	479 aa	Known RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	SIAE	Q9HAT2	523 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	SELENON	Q9NZV5	590 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	SEPT3	Q9UH03	358 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	TLK1	Q9UKI8	766 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	HTR1A	P08908	422 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	HTR7	P34969	479 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PCDH1	Q08174	1060 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	PLA2G4E	Q3MJ16	856 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ZFPM1	Q8IX07	1006 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	ADGRG5	Q8IZF4	528 aa		10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	LENG8	Q96PV6	779 aa	Predicted RBP	10.41	□□□□□ -0.74
SREBF2-208	ENST00000491541	TCF12	Q99081	682 aa		10.41	□□□□□ -0.74

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