RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZSCAN30Q86W11 494 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 OR6K2Q8NGY2 324 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 RAB7BQ96AH8 199 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 ARHGEF26Q96DR7 871 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 HMCESQ96FZ2 354 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 SNRNP25Q9BV90 132 aaKnown RBP17.74■□□□□ 0.43
SEC13-218ENST00000490283 SCNM1Q9BWG6 230 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 ARHGAP42A6NI28 874 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 WNT9AO14904 365 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 HYAL3O43820 417 aaPredicted RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 CBFA2T3O75081 653 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 ITGAVP06756 1048 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 FTH1P19P0C7X4 201 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 HNRNPA2B1P22626 353 aaKnown RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 MIPP30301 263 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 RPS21P63220 83 aaKnown RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 SERINC3Q13530 473 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 MYLK3Q32MK0 819 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 ZNF805Q5CZA5 627 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 PPP6R3Q5H9R7 873 aaPredicted RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 HGSNATQ68CP4 663 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 DBX2Q6ZNG2 339 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 PARS2Q7L3T8 475 aaKnown RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 GLRX5Q86SX6 157 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 KLHDC7BQ96G42 594 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 FEM1CQ96JP0 617 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 NOL6Q9H6R4 1146 aaKnown RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 ZWILCHQ9H900 591 aa17.73■□□□□ 0.43
SEC13-218ENST00000490283 UBA2Q9UBT2 640 aaPredicted RBP17.73■□□□□ 0.43
SEC13-218ENST00000490283 AP1G1O43747 822 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 LRCH4O75427 683 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 UGT2B4P06133 528 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 TPM1P09493 284 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 PRLRP16471 622 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 SPINK2P20155 84 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 PCK1P35558 622 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
SEC13-218ENST00000490283 PIGHQ14442 188 aaPredicted RBP17.72■□□□□ 0.43
SEC13-218ENST00000490283 ATXN7L2Q5T6C5 722 aaPredicted RBP17.72■□□□□ 0.43
SEC13-218ENST00000490283 RFX8Q6ZV50 586 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 KLK6Q92876 244 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 MYOCQ99972 504 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 XPO4Q9C0E2 1151 aaKnown RBP17.72■□□□□ 0.43
SEC13-218ENST00000490283 TSPY26PQ9H489 355 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 ERVMER34-1Q9H9K5 563 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 FTSJ1Q9UET6 329 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 NEUROG3Q9Y4Z2 214 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 FADS3Q9Y5Q0 445 aa17.72■□□□□ 0.43
SEC13-218ENST00000490283 C16orf96A6NNT2 1141 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 TSPAN6O43657 245 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 GYPCP04921 128 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 GKP32189 559 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 ARL4AP40617 200 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 SGCGQ13326 291 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 TRIM14Q14142 442 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 CA9Q16790 459 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 TSR1Q2NL82 804 aaKnown RBP17.71■□□□□ 0.43
SEC13-218ENST00000490283 ZNF284Q2VY69 593 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 PRAMEF14Q5SWL7 426 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 GDPD4Q6W3E5 623 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 CHCHD4Q8N4Q1 142 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 FAM174AQ8TBP5 190 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 CELF6Q96J87 481 aaKnown RBP17.71■□□□□ 0.43
SEC13-218ENST00000490283 KCTD15Q96SI1 283 aaPredicted RBP17.71■□□□□ 0.43
SEC13-218ENST00000490283 THAP2Q9H0W7 228 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 BTBD3Q9Y2F9 522 aa17.71■□□□□ 0.43
SEC13-218ENST00000490283 TPRP12270 2363 aaKnown RBP17.71■□□□□ 0.42
SEC13-218ENST00000490283 PLXNA2O75051 1894 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 H3BRJ5 948 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 RNF103O00237 685 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 TNFSF14O43557 240 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 TOP3BO95985 862 aaKnown RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 THEGLP0DJG4 465 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ERCC2P18074 760 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 XPAP23025 273 aaPredicted RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 EPHA8P29322 1005 aaPredicted RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 CASP14P31944 242 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 GRM3Q14832 879 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ST3GAL2Q16842 350 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 BOLA3Q53S33 107 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 CCDC122Q5T0U0 273 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 CFAP58Q5T655 872 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 SEL1L3Q68CR1 1132 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ALKBH5Q6P6C2 394 aaKnown RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 GATAD2AQ86YP4 633 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 LZTR1Q8N653 840 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ARFGAP1Q8N6T3 406 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 BAHD1Q8TBE0 780 aaPredicted RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 ADAMTS14Q8WXS8 1223 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 KLHL32Q96NJ5 620 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 CALN1Q9BXU9 219 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 SLC17A9Q9BYT1 436 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 KLC2Q9H0B6 622 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 LRRC19Q9H756 370 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 SP110Q9HB58 689 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 FZD3Q9NPG1 666 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ZNHIT6Q9NWK9 470 aaKnown RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 IP6K2Q9UHH9 426 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms