RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ATOH1Q92858 354 aaPredicted RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 SKA1Q96BD8 255 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 C7orf26Q96N11 449 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 PDCL3Q9H2J4 239 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 WDR6Q9NNW5 1121 aaKnown RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 SNTG1Q9NSN8 517 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 SMC4Q9NTJ3 1288 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 TAS2R10Q9NYW0 307 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 KIAA1456Q9P272 454 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 TBC1D14Q9P2M4 693 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 ZNF70Q9UC06 446 aaPredicted RBP4.17□□□□□ -1.74
CD46-216ENST00000490278 PCDHGB5Q9Y5G0 923 aa4.17□□□□□ -1.74
CD46-216ENST00000490278 TMEM272A0A1B0GTI8 110 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 STMND1H3BQB6 276 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TNFSF14O43557 240 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 SLC25A17O43808 307 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TACC1O75410 805 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TMEM63AO94886 807 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 GALTP07902 379 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 MMP3P08254 477 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TMEM191BP0C7N4 346 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 ENO3P13929 434 aaPredicted RBP4.16□□□□□ -1.74
CD46-216ENST00000490278 SLC2A4P14672 509 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 EPHA8P29322 1005 aaPredicted RBP4.16□□□□□ -1.74
CD46-216ENST00000490278 FMO4P31512 558 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 CENPAP49450 140 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 CCR9P51686 369 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TMPRSS3P57727 454 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TAF11Q15544 211 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TSTQ16762 297 aaKnown RBP4.16□□□□□ -1.74
CD46-216ENST00000490278 SLC9B1Q4ZJI4 515 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 Q5PR19 223 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 FAM180BQ6P0A1 224 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 TMEM71Q6P5X7 295 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 ZNF548Q8NEK5 533 aaPredicted RBP4.16□□□□□ -1.74
CD46-216ENST00000490278 RASSF8Q8NHQ8 419 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 CEP76Q8TAP6 659 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 SAAL1Q96ER3 474 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 SLC29A3Q9BZD2 475 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 HSPB7Q9UBY9 170 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD46-216ENST00000490278 COL3A1P02461 1466 aaPredicted RBP4.16□□□□□ -1.74
CD46-216ENST00000490278 ADGRF5Q8IZF2 1346 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 KDM3AQ9Y4C1 1321 aa4.16□□□□□ -1.74
CD46-216ENST00000490278 LY6G6EA0A0G2JKS1 128 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 IGLV5-39A0A0G2JS06 123 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 CBY3A6NI87 242 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 EBAG9O00559 213 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 SOCS2O14508 198 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 MOSPD3O75425 235 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 UBL4AP11441 157 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 PTPN2P17706 415 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 CTPS1P17812 591 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 POU1F1P28069 291 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 ABCD1P33897 745 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 PTGER1P34995 402 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 AVPR1AP37288 418 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 HARS2P49590 506 aaKnown RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 GEMIN4P57678 1058 aaKnown RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 RALBP1Q15311 655 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 ATG9BQ674R7 924 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 NUGGCQ68CJ6 796 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 HEPHL1Q6MZM0 1159 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 C11orf87Q6NUJ2 197 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 PARM1Q6UWI2 310 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 ATF7IPQ6VMQ6 1270 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 GPAT4Q86UL3 456 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 CADM3Q8N126 398 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 TDRD7Q8NHU6 1098 aaKnown RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 METTL6Q8TCB7 284 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 BICD2Q8TD16 824 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 UCMAQ8WVF2 138 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 KLHL29Q96CT2 875 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 RNF183Q96D59 192 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 KLHL15Q96M94 604 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 NLRP4Q96MN2 994 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 NR1H4Q96RI1 486 aaPredicted RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 WDR77Q9BQA1 342 aaPredicted RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 HEMGNQ9BXL5 484 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 USP44Q9H0E7 712 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 FOXP1Q9H334 677 aaPredicted RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 KLHL31Q9H511 634 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 OLA1Q9NTK5 396 aaKnown RBP4.15□□□□□ -1.75
CD46-216ENST00000490278 C20orf141Q9NUB4 165 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 POT1Q9NUX5 634 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 ELOVL5Q9NYP7 299 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 AASSQ9UDR5 926 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 PNMA2Q9UL42 364 aa4.15□□□□□ -1.75
CD46-216ENST00000490278 A0A1W2PQM1 296 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 LDLRAD4O15165 306 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 CLDN7O95471 211 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 FGF2P09038 288 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 ZNF8P17098 575 aaPredicted RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 CHRNB2P17787 502 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 TBXAS1P24557 533 aaPredicted RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 MAN1A1P33908 653 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 TTKP33981 857 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 CTCFP49711 727 aaPredicted RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 RASSF2P50749 326 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 ZNF81P51508 661 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms