RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	P3H1	Q32P28	736 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	FYB2	Q5VWT5	728 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	TMEM25	Q86YD3	366 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	NAT16	Q8N8M0	369 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	EIF1AD	Q8N9N8	165 aa	Known RBP	18.49	■□□□□ 0.55
SRM-206	ENST00000490101	TXNDC5	Q8NBS9	432 aa	Known RBP	18.49	■□□□□ 0.55
SRM-206	ENST00000490101	MDGA1	Q8NFP4	955 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	LRRN4	Q8WUT4	740 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	CASKIN2	Q8WXE0	1202 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	ARHGEF2	Q92974	986 aa	Known RBP	18.49	■□□□□ 0.55
SRM-206	ENST00000490101	FAM114A2	Q9NRY5	505 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	MARK1	Q9P0L2	795 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	ASIC3	Q9UHC3	531 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	IPO11	Q9UI26	975 aa	Known RBP	18.49	■□□□□ 0.55
SRM-206	ENST00000490101	CHD5	Q8TDI0	1954 aa		18.49	■□□□□ 0.55
SRM-206	ENST00000490101	MAP1B	P46821	2468 aa	Known RBP	18.49	■□□□□ 0.55
SRM-206	ENST00000490101		H0Y626	953 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	MATN3	O15232	486 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	ZSCAN5DP	P0CG00	497 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
SRM-206	ENST00000490101	ETS1	P14921	441 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	BCKDHB	P21953	392 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	RPL21	P46778	160 aa	Known RBP	18.48	■□□□□ 0.55
SRM-206	ENST00000490101	OXCT1	P55809	520 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	MRPS21	P82921	87 aa	Known RBP	18.48	■□□□□ 0.55
SRM-206	ENST00000490101	WASHC5	Q12768	1159 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	CUL1	Q13616	776 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	TRIP13	Q15645	432 aa	Predicted RBP	18.48	■□□□□ 0.55
SRM-206	ENST00000490101	EMC10	Q5UCC4	262 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	TIGD7	Q6NT04	549 aa	Predicted RBP	18.48	■□□□□ 0.55
SRM-206	ENST00000490101	TMEM92	Q6UXU6	159 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	ARHGAP36	Q6ZRI8	547 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	TPGS1	Q6ZTW0	290 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	PRUNE1	Q86TP1	453 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	RASSF3	Q86WH2	238 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	CARNMT1	Q8N4J0	409 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	IL17RC	Q8NAC3	791 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	OR52K2	Q8NGK3	314 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	FIBIN	Q8TAL6	211 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	MAML1	Q92585	1016 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	ACE2	Q9BYF1	805 aa	Predicted RBP	18.48	■□□□□ 0.55
SRM-206	ENST00000490101	DPH5	Q9H2P9	285 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	PAK5	Q9P286	719 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	SNX24	Q9Y343	169 aa		18.48	■□□□□ 0.55
SRM-206	ENST00000490101	ABCA7	Q8IZY2	2146 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101		A0A0A0MRY4	1105 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ESYT3	A0FGR9	886 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	RNF103	O00237	685 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ALDH1A2	O94788	518 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ITIH2	P19823	946 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ACTN2	P35609	894 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ACVRL1	P37023	503 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ADCY8	P40145	1251 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	EIF2D	P41214	584 aa	Known RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	GRIA2	P42262	883 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	CLCN6	P51797	869 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	VSNL1	P62760	191 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	IFI35	P80217	286 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	GAD2	Q05329	585 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	IL10RB	Q08334	325 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	TRADD	Q15628	312 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	KCTD19	Q17RG1	926 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ANO4	Q32M45	955 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	PMS2CL	Q68D20	193 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	CCNI2	Q6ZMN8	369 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	ZNF557	Q8N988	423 aa	Predicted RBP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	LRRC45	Q96CN5	670 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	SNF8	Q96H20	258 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	SPATA13	Q96N96	652 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	VAT1	Q99536	393 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	IL12RB2	Q99665	862 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	EDEM2	Q9BV94	578 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	FAM129A	Q9BZQ8	928 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	TRIM31	Q9BZY9	425 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	GRHL1	Q9NZI5	618 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	WHRN	Q9P202	907 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.47	■□□□□ 0.55
SRM-206	ENST00000490101	TRHDE	Q9UKU6	1024 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	OR51B4	Q9Y5P0	310 aa		18.47	■□□□□ 0.55
SRM-206	ENST00000490101	NYNRIN	Q9P2P1	1898 aa	Known RBP	18.46	■□□□□ 0.55
SRM-206	ENST00000490101		A0A0D9SEW6	157 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	KCNK1	O00180	336 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	KDELR3	O43731	214 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	PRAMEF11	O60813	436 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	OPHN1	O60890	802 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	PEX11B	O96011	259 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	DHPS	P49366	369 aa	Predicted RBP	18.46	■□□□□ 0.55
SRM-206	ENST00000490101	CARS	P49589	748 aa	Known RBP	18.46	■□□□□ 0.55
SRM-206	ENST00000490101	VPS41	P49754	854 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	GPS1	Q13098	491 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	CDH18	Q13634	790 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	FSCB	Q5H9T9	825 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	ANKRD20A2	Q5SQ80	823 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	ANKRD20A1	Q5TYW2	823 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	ANKRD20A3	Q5VUR7	823 aa		18.46	■□□□□ 0.55
SRM-206	ENST00000490101	RNF219	Q5W0B1	726 aa	Predicted RBP	18.46	■□□□□ 0.55
SRM-206	ENST00000490101	CYP2U1	Q7Z449	544 aa		18.46	■□□□□ 0.55

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