RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 PCOLCE2Q9UKZ9 415 aa18.13■□□□□ 0.49
ABCF3-217ENST00000489719 A0A087X0T9 212 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 A0A1B0GTQ1 180 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 ARHGAP42A6NI28 874 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 RNF103O00237 685 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 PCDHGA12O60330 932 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 LRCH4O75427 683 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 TMCC1O94876 653 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 IGSF6O95976 241 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 TPM1P09493 284 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 FAM228BP0C875 321 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 ADRB3P13945 408 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 GKP32189 559 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 HCAR3P49019 387 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 RHOAP61586 193 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 ZNF805Q5CZA5 627 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 RFX8Q6ZV50 586 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 IQCHQ86VS3 1027 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 KLHDC7BQ96G42 594 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 GDAP1L1Q96MZ0 367 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 PEBP4Q96S96 227 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 KCTD15Q96SI1 283 aaPredicted RBP18.12■□□□□ 0.49
ABCF3-217ENST00000489719 KLC2Q9H0B6 622 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 THAP2Q9H0W7 228 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 ZWILCHQ9H900 591 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 ZNHIT6Q9NWK9 470 aaKnown RBP18.12■□□□□ 0.49
ABCF3-217ENST00000489719 UBA2Q9UBT2 640 aaPredicted RBP18.12■□□□□ 0.49
ABCF3-217ENST00000489719 IP6K2Q9UHH9 426 aa18.12■□□□□ 0.49
ABCF3-217ENST00000489719 PCDH15Q96QU1 1955 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 C16orf96A6NNT2 1141 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 NEMP1O14524 444 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 CBFA2T3O75081 653 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 ERCC2P18074 760 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 AKT2P31751 481 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 GRK6P43250 576 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 ARRB1P49407 418 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-217ENST00000489719 NXPH1P58417 271 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 RPS21P63220 83 aaKnown RBP18.11■□□□□ 0.49
ABCF3-217ENST00000489719 IL9RQ01113 521 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 ZNF284Q2VY69 593 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 INAVAQ3KP66 663 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 ATXN7L2Q5T6C5 722 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-217ENST00000489719 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 GDPD4Q6W3E5 623 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 TTC7BQ86TV6 843 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 OXR1Q8N573 874 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 OR8K1Q8NGG5 319 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 RAB7BQ96AH8 199 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 CELF6Q96J87 481 aaKnown RBP18.11■□□□□ 0.49
ABCF3-217ENST00000489719 SLC39A8Q9C0K1 460 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 LRRC19Q9H756 370 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 ERVMER34-1Q9H9K5 563 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 APOBEC2Q9Y235 224 aaKnown RBP18.11■□□□□ 0.49
ABCF3-217ENST00000489719 FADS3Q9Y5Q0 445 aa18.11■□□□□ 0.49
ABCF3-217ENST00000489719 ASCC3Q8N3C0 2202 aaKnown RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 H3BRJ5 948 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 MYO1FO00160 1098 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 YKT6O15498 198 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 AP1G1O43747 822 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 CYP1A2P05177 515 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 UGT2B4P06133 528 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 ITGAVP06756 1048 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 PRLRP16471 622 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 HNRNPA2B1P22626 353 aaKnown RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 EIF4A3P38919 411 aaKnown RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 ARL4AP40617 200 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 PAPOLAP51003 745 aaKnown RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 SGCGQ13326 291 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 TRIM14Q14142 442 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 CYTH1Q15438 398 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 KIAA1161Q6NSJ0 714 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 PARS2Q7L3T8 475 aaKnown RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 LZTR1Q8N653 840 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 NETO2Q8NC67 525 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 RNF214Q8ND24 703 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 KLHL32Q96NJ5 620 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 NUP85Q9BW27 656 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 SLC17A9Q9BYT1 436 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 CWC15Q9P013 229 aaKnown RBP18.1■□□□□ 0.49
ABCF3-217ENST00000489719 ANAPC7Q9UJX3 599 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 ADAMTS9Q9P2N4 1935 aa18.1■□□□□ 0.49
ABCF3-217ENST00000489719 J3KR12 359 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 TSPAN6O43657 245 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 PAK4O96013 591 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-217ENST00000489719 HNRNPH3P31942 346 aaKnown RBP18.09■□□□□ 0.49
ABCF3-217ENST00000489719 SSR1P43307 286 aaKnown RBP18.09■□□□□ 0.49
ABCF3-217ENST00000489719 SEL1L3Q68CR1 1132 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 GLRX5Q86SX6 157 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 ZSCAN30Q86W11 494 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 HSPH1Q92598 858 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 ARHGEF26Q96DR7 871 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 MYOCQ99972 504 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 SCNM1Q9BWG6 230 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 DEF6Q9H4E7 631 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 ZFR2Q9UPR6 939 aaKnown RBP18.09■□□□□ 0.49
ABCF3-217ENST00000489719 CA5BQ9Y2D0 317 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 MFHAS1Q9Y4C4 1052 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 HS3ST3A1Q9Y663 406 aa18.09■□□□□ 0.49
ABCF3-217ENST00000489719 DFFAO00273 331 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms