RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ALOX15BO15296 676 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 MID1O15344 667 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 RNASEH2AO75792 299 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 TUBBP07437 444 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 GOT1P17174 413 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 OR1E1P30953 314 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 PSMD8P48556 350 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 AFF3P51826 1226 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 CDH6P55285 790 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 GRIK2Q13002 908 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC14A1Q13336 389 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 KLF1Q13351 362 aaPredicted RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 DPYSQ14117 519 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 SIX1Q15475 284 aaPredicted RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 TEAD4Q15561 434 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 ACCSLQ4AC99 568 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 N4BP2L1Q5TBK1 243 aaPredicted RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 FAM46CQ5VWP2 391 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 KIAA0895LQ68EN5 471 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 IL27RAQ6UWB1 636 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 SPOCD1Q6ZMY3 1216 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 VSIG1Q86XK7 387 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 SH2D3CQ8N5H7 860 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 PQLC3Q8N755 202 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 UBL4BQ8N7F7 174 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 DCAF4L2Q8NA75 395 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 C1orf216Q8TAB5 229 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 OR8D1Q8WZ84 308 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 BIRC7Q96CA5 298 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 MS4A14Q96JA4 679 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 CCDC114Q96M63 670 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 CSPG4P5Q96PW8 444 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 ZYG11BQ9C0D3 744 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 DHX35Q9H5Z1 703 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 RETREG1Q9H6L5 497 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 MPP6Q9NZW5 540 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 CWC15Q9P013 229 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 PPARGC1AQ9UBK2 798 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 ZNF212Q9UDV6 495 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 HS3ST2Q9Y278 367 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 SPTBN2O15020 2390 aa10.77□□□□□ -0.69
SCAMP4-208ENST00000489554 CEP192Q8TEP8 1941 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 PCDH15Q96QU1 1955 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 ILVBLA1L0T0 632 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 LRRD1A4D1F6 860 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 MCF2LO15068 1137 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 LRIG2O94898 1065 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 FSBPO95073 299 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 ZRANB2O95218 330 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 CER1O95813 267 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 IL1BP01584 269 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 KRT10P13645 584 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 VAV1P15498 845 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 DESP17661 470 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 TCP1P17987 556 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 CD27P26842 260 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 NUMBP49757 651 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 CLCN6P51797 869 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 COPS2P61201 443 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 HNRNPDQ14103 355 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 PDK2Q15119 407 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 DLG2Q15700 870 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 PPP2R5EQ16537 467 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 EFHC2Q5JST6 749 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 TFAP2DQ7Z6R9 452 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 PIP4P1Q86T03 277 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 RCOR2Q8IZ40 523 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 DEFB124Q8NES8 71 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 OR2T34Q8NGX1 318 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 PCDH19Q8TAB3 1148 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 UBXN4Q92575 508 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 RBM41Q96IZ5 413 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 PBKQ96KB5 322 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 ZNF670Q9BS34 389 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 KLC2Q9H0B6 622 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 NEUROG2Q9H2A3 272 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 ETNK2Q9NVF9 386 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 OR12D3Q9UGF7 316 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 SERGEFQ9UGK8 458 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 VPS51Q9UID3 782 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 TTC7AQ9ULT0 858 aaPredicted RBP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 MFHAS1Q9Y4C4 1052 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 FARP1Q9Y4F1 1045 aaPredicted RBP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 MRFAP1Q9Y605 127 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 SAR1BQ9Y6B6 198 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 CNOT1A5YKK6 2376 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 CHD5Q8TDI0 1954 aa10.76□□□□□ -0.69
SCAMP4-208ENST00000489554 A0A0D9SEW6 157 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 CXorf51AA0A1B0GTR3 108 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 FAM47DPA6NHR8 397 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 EFCAB8A8MWE9 144 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 C1QTNF3-AMACRE9PGA6 284 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 GIPC1O14908 333 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC7A4O43246 635 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 SNAP91O60641 907 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 GJB3O75712 270 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 IGHV4-34P06331 123 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 SRCP12931 536 aa10.75□□□□□ -0.69
SCAMP4-208ENST00000489554 PMLP29590 882 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms